Job Description P0AAB6 Confidence 98.24% Date Thu Jan 5 11:12:27 GMT 2012 Rank 71 Aligned Residues 165 % Identity 13% Template c3ogzA_ PDB info PDB header:transferase Chain: A: PDB Molecule:udp-sugar pyrophosphorylase; PDBTitle: protein structure of usp from l. major in apo-form Resolution 2.03 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.				.	.	.	.	.	.	.	40	.	.	.	.	.	.				.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																																.	.	.															.	.	.
Query SS confidence																																.	.	.															.	.	.
Query Sequence		N	L	K	A	V	I	P	V	A	G	L	G	M	H	M	L	P	A	T	K	A	I	P	K	E	M	L	P	I	V	.	.	.	D	K	P	M	I	Q	Y	I	V	D	E	I	V	A	.	.	.	A	G	I	K	E	I	L	L	V	T	H	A	S	K	N	A	V	E	N	H	F	D	T	S	Y	E	L	E	S	L
Query Conservation																																.	.	.															.	.	.
Alig confidence																		.	.	.												.	.	.															.	.	.
Template Conservation																		.	.	.
Template Sequence		K	T	V	F	V	L	V	A	G	G	L	G	E	R	L	G	.	.	.	Y	S	S	I	K	V	S	L	P	V	E	T	A	T	N	T	T	Y	L	A	Y	Y	L	R	W	A	Q	R	V	G	G	K	E	V	P	F	V	I	M	T	S	D	D	T	H	D	R	T	L	Q	L	L	R	E	L	Q	L	E	V	P	N
Template Known Secondary structure		G												G	G	G	T	.	.	.					G	G	G	S	B	S		T	T	T			B															T	T									T	T	T											T	T				T	T
Template Predicted Secondary structure																		.	.	.
Template SS confidence
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.				130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.													.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	E	Q	R	V	K	R	Q	L	L	A	E	V	Q	S	I	C	P	P	G	V	T	I	M	N	V	R	Q	G	E	P	L	G	L	G	H	S	I	L	C	A	R	P	A	I	.	.	.	.	.	.	.	.	.	.	.	.	G	D	N	P	F	V	V	V	L	P	D	V	V	I	D	D	A	S	A	D	P	L	R
Query Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																															.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.
Template Conservation																																																																										.	.	.	.	.	.	.
Template Sequence		L	H	V	L	K	Q	G	Q	V	F	C	F	A	D	S	A	A	H	L	A	L	D	E	T	G	K	L	L	R	K	P	H	G	H	G	D	V	H	S	L	I	Y	N	A	T	V	A	Q	P	L	V	N	D	W	L	A	A	G	Y	E	S	I	V	F	I	Q	D	T	N	A	G	A	.	.	.	.	.	.	.	T
Template Known Secondary structure													B	S	S	T	T			B		B		T	T	S	S	B							T	T										B				B								T	T									T	T	B	T	T		.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																										.	.	.	.	.	.	.
Template SS confidence
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.								.
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	N	L	A	A	M	I	A	R	F	N	E	T	G	R	S	Q	V	L	A	K	R	M	P	G	D	L	S	E	Y	S	V	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	T	I	P	I	S	L	A	L	S	A	E	H	S	L	D	M	N	F	T	C	I	P	R	V	P	K	E	P	I	G	L	L
Template Known Secondary structure														T	T		S										S	S		S	S
Template Predicted Secondary structure
Template SS confidence
		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions