Job Description P0AAB6 Confidence 98.96% Date Thu Jan 5 11:12:27 GMT 2012 Rank 62 Aligned Residues 195 % Identity 15% Template c3oc9A_ PDB info PDB header:transferase Chain: A: PDB Molecule:udp-n-acetylglucosamine pyrophosphorylase; PDBTitle: crystal structure of putative udp-n-acetylglucosamine2 pyrophosphorylase from entamoeba histolytica Resolution 1.80 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.				.	.	.	.	.	.	.	40	.	.	.	.	.	.														.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
Predicted Secondary structure																															.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																															.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	K	A	V	I	P	V	A	G	L	G	M	H	M	L	P	A	T	K	A	I	P	K	E	M	L	P	I	V	.	.	.	D	K	P	M	I	Q	Y	I	V	D	E	I	V	A	.	.	.	.	.	.	.	.	.	.	.	.	.	A	G	I	K	E	I	L	L	V	T	H	A	S	K	N	A	V	E	N	H	F
Query Conservation																															.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.												.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.
Template Sequence		T	A	L	I	T	P	A	G	G	Q	G	S	R	L	G	.	.	.	F	E	H	P	K	G	M	F	V	L	P	F	E	I	P	K	S	I	F	Q	M	T	S	E	R	L	L	R	L	Q	E	L	A	S	E	Y	S	H	Q	K	N	V	M	I	H	W	F	L	M	T	N	E	E	T	I	E	E	I	N	N	Y	F
Template Known Secondary structure										S	B		T	T	T	T	.	.	.			S	B	G	G	G					S	S	S																										S												T	T	T
Template Predicted Secondary structure																	.	.	.
Template SS confidence
		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.				.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.																						.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.
Query Sequence		D	T	S	Y	E	L	E	S	L	L	E	Q	R	V	K	R	Q	L	L	A	E	V	Q	S	I	C	P	P	G	V	T	I	M	N	V	R	Q	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	P	L	G	L	G	H	S	I	L	C	A	R	P	A	I	.	.	.	.	.
Query Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	E	H	Q	Y	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	L	S	S	E	Q	I	H	C	F	P	Q	G	M	L	P	V	V	D	F	N	G	K	I	L	Y	E	K	K	D	K	P	Y	M	A	P	N	G	H	G	G	L	F	K	A	L	K	D	N	G	I	L	E	F	M
Template Known Secondary structure				T	G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	S		T	T	S												B		T	T	S		B					T	T									G	G	G								T	T
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		109	110	.	.	.	.																				.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
					122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.		.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.																																											.
Query SS confidence		.	.	.																																											.
Query Sequence		.	.	.	G	D	N	P	F	V	V	V	L	P	D	V	V	I	D	D	A	S	A	D	P	L	R	Y	N	L	A	A	M	I	A	R	F	N	E	T	G	R	S	Q	V	L	.	A	K	R	M	P	G	D	L	S	E	Y	S	V	I	Q	T	K	E	P	L	D	R	E	G	K	V	S	R	I	V	E	F	I	E
Query Conservation		.	.	.																																											.
Alig confidence		.	.	.																				.	.	.	.	.	.	.																	.
Template Conservation																								.	.	.	.	.	.	.
Template Sequence		N	E	K	G	I	K	Y	S	V	A	H	N	V	D	N	I	L	C	K	D	V	D	.	.	.	.	.	.	.	P	N	M	I	G	Y	M	D	L	L	Q	S	E	I	C	I	K	I	V	K	K	G	F	K	E	E	K	V	G	V	L	V	K	E	Q	E	R	I	K	V	V	E	Y	T	E	L	T	D	E	L	N
Template Known Secondary structure					T									T	T	B	T	T			S	S		.	.	.	.	.	.	.										T	T		S										S	T	T		S								T	T							G	G	G			T	T	T	T
Template Predicted Secondary structure																								.	.	.	.	.	.	.
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.								.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	P	D	Q	P	Q	T	L	D	S	D	I	M	A	V	G	R	Y	V	L	S	A	D	I	W	P	E	L	E	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	Q	L	S	N	G	E	F	I	Y	N	C	G	H	I	S	I	N	G	Y	S	T	S	F	L	E	K	A	A	E
Template Known Secondary structure			B		T	T	S		B	S	S																			T	T
Template Predicted Secondary structure
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions