Job Description P0AAB6 Confidence 100.00% Date Thu Jan 5 11:12:27 GMT 2012 Rank 13 Aligned Residues 250 % Identity 15% Template c3brkX_ PDB info PDB header:transferase Chain: X: PDB Molecule:glucose-1-phosphate adenylyltransferase; PDBTitle: crystal structure of adp-glucose pyrophosphorylase from2 agrobacterium tumefaciens Resolution 2.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.		.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																					.
Query SS confidence																																					.
Query Sequence		M	T	N	L	K	A	V	I	P	V	A	G	L	G	M	H	M	L	P	A	T	K	A	I	P	K	E	M	L	P	I	V	D	K	P	.	M	I	Q	Y	I	V	D	E	I	V	A	A	G	I	K	E	I	L	L	V	T	H	A	S	K	N	A	V	E	N	H	F	D	T	S	Y	E	L	E	S	L	L	E	Q
Query Conservation																																					.
Alig confidence																																					.																																							.	.	.	.	.	.
Template Conservation																																																																												.	.	.	.	.	.
Template Sequence		A	R	D	A	X	A	Y	V	L	A	G	G	R	G	S	R	L	K	E	L	T	D	R	R	A	K	P	A	V	Y	F	G	G	K	A	R	I	I	D	F	A	L	S	N	A	L	N	S	G	I	R	R	I	G	V	A	T	Q	Y	K	A	H	S	L	I	R	H	L	Q	R	G	W	D	F	.	.	.	.	.	.
Template Known Secondary structure		G	G	G												G	G	G	G	G	G	G	S	S	S		G	G	G	S			T	T	T			T											T	T										T	T												S			.	.	.	.	.	.
Template Predicted Secondary structure																																																																												.	.	.	.	.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.				.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure																																												.	.	.
Query SS confidence																																												.	.	.
Query Sequence		R	V	K	R	Q	L	L	A	E	V	Q	S	I	C	P	P	G	V	T	I	M	N	V	R	Q	G	E	P	L	G	L	G	H	S	I	L	C	A	R	P	A	I	.	.	.	G	D	N	P	F	V	V	V	L	P	D	V	V	I	D	D	A	S	A	D	P	L	R	Y	N	L	A	A	M	I	A	R	F	N	E
Query Conservation																																												.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																																.	.	.																.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.																																																		.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	F	R	P	E	R	N	E	S	F	D	I	L	P	A	S	W	Y	E	G	T	A	D	A	V	Y	Q	N	I	D	I	I	E	P	Y	A	P	E	Y	X	V	I	L	A	G	D	H	I	Y	K	.	.	.	.	.	.	.	.	X	D	Y	E	Y	X	L	Q	Q	H	V	D
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.			G	G	G	T																				T	T										S							S	S					.	.	.	.	.	.	.	.	B		T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.																																																		.	.	.	.	.	.	.	.
Template SS confidence
													84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.									.	.	.	.	.	.	.	140	.	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.			170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.					.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure															.	.																																				.	.	.	.
Query SS confidence															.	.																																				.	.	.	.
Query Sequence		T	G	R	S	Q	V	L	A	K	R	M	P	G	.	.	D	L	S	E	Y	S	V	I	Q	T	K	E	P	L	D	R	E	G	K	V	S	R	I	V	E	F	I	E	K	P	D	Q	P	Q	T	.	.	.	.	L	D	S	D	I	M	A	V	G	R	Y	V	L	S	A	D	I	W	P	E	L	E	R	T	Q	P
Query Conservation															.	.																																				.	.	.	.
Alig confidence															.	.															.	.	.	.	.	.	.															.	.	.	.
Template Conservation																															.	.	.	.	.	.	.
Template Sequence		S	G	A	D	V	T	I	G	C	L	E	V	P	R	X	E	A	T	G	F	G	V	X	H	V	N	E	K	D	.	.	.	.	.	.	.	E	I	I	D	F	I	E	K	P	A	D	P	P	G	I	P	G	N	E	G	F	A	L	A	S	X	G	I	Y	V	F	H	T	K	F	L	X	E	A	V	R	R	D	A
Template Known Secondary structure		T	T		S										T	T	G	G	G	G	S							T	T	S	.	.	.	.	.	.	.	B							S		S	S				B	T	T	B	T	T																					T	S	S
Template Predicted Secondary structure																															.	.	.	.	.	.	.
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180								.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
		231	.	.	.	.	.	.	.	.	240				.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure												.	.	.
Query SS confidence												.	.	.
Query Sequence		G	A	W	G	R	I	Q	L	T	D	.	.	.	A	I	A	E	L	A	K	K	Q	S	V	D	A	M	L	M	T	G	D	S	Y	D	C	G	K	K	M	G	Y	M	Q	A	F	V	K	Y	G	L	R	N	L	K
Query Conservation												.	.	.
Alig confidence												.	.	.
Template Conservation
Template Sequence		A	D	I	I	P	Y	I	V	E	H	G	K	A	V	A	H	R	F	A	D	S	C	V	R	S	D	F	E	H	E	P	Y	W	R	D	V	G	T	I	D	A	Y	W	Q	A	N	I	D	L	T	D	V	V	P	D
Template Known Secondary structure					T	T						S											B				T	T		S	S								S											T	T	S	S	S		S
Template Predicted Secondary structure
Template SS confidence
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions