Job Description P0AAB6 Confidence 98.61% Date Thu Jan 5 11:12:27 GMT 2012 Rank 67 Aligned Residues 212 % Identity 16% Template c2yqsA_ PDB info PDB header:transferase Chain: A: PDB Molecule:udp-n-acetylglucosamine pyrophosphorylase; PDBTitle: crystal structure of uridine-diphospho-n-acetylglucosamine2 pyrophosphorylase from candida albicans, in the product-binding form Resolution 2.30 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.				.	.	.	.	.	.	.	40	.	.	.	.	.	.	.														.	.	50	.	.	.	.	.	.	.	.	.		60	.	.	.	.	.
Predicted Secondary structure																																.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.													.
Query SS confidence																																.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.													.
Query Sequence		N	L	K	A	V	I	P	V	A	G	L	G	M	H	M	L	P	A	T	K	A	I	P	K	E	M	L	P	I	V	.	.	.	D	K	P	M	I	Q	Y	I	V	D	E	I	V	A	A	.	.	.	.	.	.	.	.	.	.	.	.	.	G	I	K	E	I	L	L	V	T	H	A	S	.	K	N	A	V	E	N
Query Conservation																																.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.													.
Alig confidence																		.	.	.												.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.													.
Template Conservation																		.	.	.
Template Sequence		E	V	A	V	L	L	M	A	G	G	Q	G	T	R	L	G	.	.	.	S	S	A	P	K	G	C	F	N	I	E	L	P	S	Q	K	S	L	F	Q	I	Q	A	E	K	I	L	K	I	E	Q	L	A	Q	Q	Y	L	K	S	T	K	K	P	I	I	N	W	Y	I	M	T	S	G	P	T	R	N	A	T	E	S
Template Known Secondary structure														G	G	G	T	.	.	.		S	S		G	G	G						T	T																								T		S	S
Template Predicted Secondary structure																		.	.	.
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.				.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
		66	.	.	.	70	.	.	.	.	.	.				.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120									.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure													.	.	.																																													.	.	.	.	.	.	.	.
Query SS confidence													.	.	.																																													.	.	.	.	.	.	.	.
Query Sequence		H	F	D	T	S	Y	E	L	E	S	L	.	.	.	L	E	Q	R	V	K	R	Q	L	L	A	E	V	Q	S	I	C	P	P	G	V	T	I	M	N	V	R	Q	G	E	P	L	G	L	G	H	S	I	L	C	A	R	P	A	.	.	.	.	.	.	.	.	I	G	D	N	P	F	V	V	V	L	P	D	V	V
Query Conservation													.	.	.																																													.	.	.	.	.	.	.	.
Alig confidence													.	.	.																																													.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	F	I	E	N	N	Y	F	G	L	N	S	H	Q	V	I	F	F	N	Q	G	T	L	P	C	F	N	L	Q	G	N	K	I	L	L	E	L	K	N	S	I	C	Q	S	P	D	G	N	G	G	L	Y	K	A	L	K	D	N	G	I	L	D	D	L	N	S	K	G	I	K	H	I	H	M	Y	C	V	D	N	C
Template Known Secondary structure						T	G	G	G	G	S		G	G	G														T	T	S	S	S	B					T	T									G	G	G								T	T									T									T	T	B	T
Template Predicted Secondary structure
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.										.	.	.	.
Predicted Secondary structure																																																																					.	.	.	.	.	.	.	.	.
Query SS confidence																																																																					.	.	.	.	.	.	.	.	.
Query Sequence		I	D	D	A	S	A	D	P	L	R	Y	N	L	A	A	M	I	A	R	F	N	E	T	G	R	S	Q	V	L	A	K	R	M	P	G	D	L	S	E	Y	S	V	I	Q	T	K	E	P	L	D	R	E	G	K	V	S	R	I	V	E	F	I	E	K	P	D	Q	.	.	.	.	.	.	.	.	.	P	Q	T	L
Query Conservation																																																																					.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.																																	.	.	.																				.	.	.	.	.	.	.	.	.
Template Conservation								.	.	.	.	.	.	.																																	.	.	.
Template Sequence		L	V	K	V	A	D	.	.	.	.	.	.	.	P	I	F	I	G	F	A	I	A	K	K	F	D	L	A	T	K	V	V	R	K	R	D	A	N	E	S	V	G	L	I	V	.	.	.	L	D	Q	D	N	Q	K	P	C	V	I	E	Y	S	E	I	S	Q	E	L	A	N	K	K	D	P	Q	D	S	S	K	L
Template Known Secondary structure		T			T	T		.	.	.	.	.	.	.											T		S									S	S	T	T		S						.	.	.			T	T	T	T							G	G	G	S										T	T
Template Predicted Secondary structure								.	.	.	.	.	.	.																																	.	.	.
Template SS confidence
		260	.	.	.	.	.								.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.				.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	S	D	I	M	A	V	G	R	Y	V	L	S	A	D	I	W	P	E	L	E	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	L	R	A	A	N	I	V	N	H	Y	Y	S	V	E	F	L	N	K	M	I	P
Template Known Secondary structure		S	S
Template Predicted Secondary structure
Template SS confidence
		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions