Job Description P0AAB6 Confidence 99.83% Date Thu Jan 5 11:12:27 GMT 2012 Rank 54 Aligned Residues 215 % Identity 14% Template c2vshB_ PDB info PDB header:transferase Chain: B: PDB Molecule:2-c-methyl-d-erythritol 4-phosphate PDBTitle: synthesis of cdp-activated ribitol for teichoic acid2 precursors in streptococcus pneumoniae Resolution 2.00 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.		.	50	.	.	.	.	.	.		.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																																												.									.
Query SS confidence																																												.									.
Query Sequence		V	I	P	V	A	G	L	G	M	H	M	L	P	A	T	K	A	I	P	K	E	M	L	P	I	V	D	K	P	M	I	Q	Y	I	V	D	E	I	V	A	A	G	.	I	K	E	I	L	L	V	T	.	H	A	S	K	N	A	V	E	N	H	F	D	T	S	Y	E	L	E	S	L	L	E	Q	R	V	K	R	Q
Query Conservation																																												.									.
Alig confidence											.	.	.	.	.	.	.	.	.																									.									.																		.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.	.	.	.																																																				.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	I	Y	A	G	I	L	A	G	.	.	.	.	.	.	.	.	.	P	K	Q	F	L	E	L	G	D	R	P	I	L	I	H	T	I	E	K	F	V	L	E	P	S	I	E	K	I	V	V	G	V	H	G	D	W	V	S	H	A	E	D	L	V	D	K	Y	L	P	L	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure											.	.	.	.	.	.	.	.	.		G	G	G	S			T	T													T		T	T										G	G	G													G	G	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.																																																				.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.										10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.				.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure																																							.	.	.
Query SS confidence																																							.	.	.
Query Sequence		L	L	A	E	V	Q	S	I	C	P	P	G	V	T	I	M	N	V	R	Q	G	E	P	L	G	L	G	H	S	I	L	C	A	R	P	A	I	.	.	.	G	D	N	P	F	V	V	V	L	P	D	V	V	I	D	D	A	S	A	D	P	L	R	Y	N	L	A	A	M	I	A	R	F	N	E	T	G	R	S	Q
Query Conservation																																							.	.	.
Alig confidence		.	.	.	.	.	.	.	.																														.	.	.													.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.																																													.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	Y	K	E	R	I	I	I	T	K	G	G	A	D	R	N	T	S	I	K	N	I	I	E	A	I	D	A	Y	R	P	L	T	P	E	D	I	V	V	T	H	D	S	V	R	.	.	.	.	.	.	P	F	I	T	L	R	M	I	Q	D	N	I	Q	L	A	Q	N	H	D	A	V	D
Template Known Secondary structure		.	.	.	.	.	.	.	.	G	G	G	G								S	S																S				T	T								T	T		.	.	.	.	.	.	T	T															S	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.																																													.	.	.	.	.	.
Template SS confidence
										72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.							.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	A	K	R	M	P	G	D	L	S	E	Y	S	V	I	Q	T	K	E	P	L	D	R	E	G	K	V	S	R	I	V	E	F	I	E	K	P	D	Q	P	Q	T	L	D	S	D	I	M	A	V	G	R	Y	V	L	S	A	D	I	W	P	E	L	E	R	T	Q	P	G	A	W	G	R	I	Q	L	T	D	A
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.																					.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.																					.
Template Sequence		T	V	V	E	A	.	.	.	.	.	.	.	.	.	.	.	.	.	V	D	T	I	V	E	S	T	N	G	Q	F	I	T	D	I	P	N	R	A	H	L	Y	.	.	.	.	.	.	.	Q	G	Q	T	P	Q	T	F	R	C	K	D	F	M	D	L	Y	G	S	L	.	S	D	E	E	K	E	I	L	T	D	A
Template Known Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.		S				B		S	S	S	S	S		S	B				G	G	G			.	.	.	.	.	.	.																			T		.										S
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.																					.
Template SS confidence
		138	.	140	.	.														.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.								.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.		.	.	.	.	190	.	.	.	.	.	.
		242	.	.	.	.	.	.	.		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
Predicted Secondary structure										.
Query SS confidence										.
Query Sequence		I	A	E	L	A	K	K	Q	.	S	V	D	A	M	L	M	T	G	D	S	Y	D	C	G	K	K	M	G	Y	M	Q	A	F	V	K	Y
Query Conservation										.
Alig confidence										.
Template Conservation
Template Sequence		C	K	I	F	V	I	K	G	K	D	V	A	L	A	K	G	E	Y	S	N	L	K	I	T	T	V	T	D	L	K	I	A	K	S	M	I
Template Known Secondary structure								T	T										T	T						S
Template Predicted Secondary structure
Template SS confidence
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions