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Job DescriptionP0AAB6
Confidence99.83%DateThu Jan 5 11:12:27 GMT 2012
Rank54Aligned Residues215
% Identity14%Templatec2vshB_
PDB info PDB header:transferaseChain: B: PDB Molecule:2-c-methyl-d-erythritol 4-phosphate PDBTitle: synthesis of cdp-activated ribitol for teichoic acid2 precursors in streptococcus pneumoniae
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20.........30.........40........ .50...... ...60.........70.........80....
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Query Sequence  VIPVAGLGMHMLPATKAIPKEMLPIVDKPMIQYIVDEIVAAG. IKEILLVT. HASKNAVENHFDTSYELESLLEQRVKRQ
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Template Sequence  MIYAGILAG. . . . . . . . . PKQFLELGDRPILIHTIEKFVLEPSIEKIVVGVHGDWVSHAEDLVDKYLPL. . . . . . . . . . .
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GGGSTTT
TT
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   1........ 10.........20.........30.........40.........50.........60
 
   85....90.........100.........110.........120. ........130.........140.........150.........160.
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Query Sequence  LLAEVQSICPPGVTIMNVRQGEPLGLGHSILCARPAI. . . GDNPFVVVLPDVVIDDASADPLRYNLAAMIARFNETGRSQ
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Template Sequence  . . . . . . . . YKERIIITKGGADRNTSIKNIIEAIDAYRPLTPEDIVVTHDSVR. . . . . . PFITLRMIQDNIQLAQNHDAVD
Template Known Secondary structure  ........GGGG

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TT
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   72.......80.........90.........100.........110..... ....120.........130.......
 
   162.......170.........180.........190.........200.........210.........220.........230.........240.
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Query Sequence  VLAKRMPGDLSEYSVIQTKEPLDREGKVSRIVEFIEKPDQPQTLDSDIMAVGRYVLSADIWPELERTQPGAWGRIQLTDA
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Template Sequence  TVVEA. . . . . . . . . . . . . VDTIVESTNGQFITDIPNRAHLY. . . . . . . QGQTPQTFRCKDFMDLYGSL. SDEEKEILTDA
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   138.140.. .......150.........160..... ....170.........180..... ....190......
 
   242....... 250.........260.........270......
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Query Sequence  IAELAKKQ. SVDAMLMTGDSYDCGKKMGYMQAFVKY
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Template Sequence  CKIFVIKGKDVALAKGEYSNLKITTVTDLKIAKSMI
Template Known Secondary structure  TT



TT




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   197..200.........210.........220.........230..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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