Job Description P0AAB6 Confidence 99.97% Date Thu Jan 5 11:12:27 GMT 2012 Rank 32 Aligned Residues 229 % Identity 12% Template c2qh5B_ PDB info PDB header:isomerase Chain: B: PDB Molecule:mannose-6-phosphate isomerase; PDBTitle: crystal structure of mannose-6-phosphate isomerase from helicobacter2 pylori Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.		.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																	.
Query SS confidence																																	.
Query Sequence		N	L	K	A	V	I	P	V	A	G	L	G	M	H	M	L	P	A	T	K	A	I	P	K	E	M	L	P	I	V	D	.	K	P	M	I	Q	Y	I	V	D	E	I	V	A	A	G	I	K	E	I	L	L	V	T	H	A	S	K	N	A	V	E	N	H	F	D	T	S	Y	E	L	E	S	L	L	E	Q	R	V
Query Conservation																																	.
Alig confidence										.	.	.	.			.	.	.	.	.													.																																								.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.			.	.	.	.	.																																																					.	.	.	.	.	.	.	.	.
Template Sequence		K	I	K	N	I	L	L	S	.	.	.	.	S	R	.	.	.	.	.	S	L	Y	P	K	Q	F	L	K	L	F	D	H	K	S	L	F	E	L	S	F	K	R	N	A	S	L	V	D	E	T	L	I	V	C	N	E	K	H	Y	F	L	A	L	E	E	I	K	N	E	I	K	.	.	.	.	.	.	.	.	.
Template Known Secondary structure										.	.	.	.		T	.	.	.	.	.	T	T	S		G	G	G				S	S	S													T	T		S								G	G	G								T	T	T	T		S	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure										.	.	.	.			.	.	.	.	.																																																					.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.					10	.						.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.		.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																																											.
Query SS confidence																																											.
Query Sequence		K	R	Q	L	L	A	E	V	Q	S	I	C	P	P	G	V	T	I	M	N	V	R	Q	G	E	P	L	G	L	G	H	S	I	L	C	A	R	P	A	I	G	.	D	N	P	F	V	V	V	L	P	D	V	V	I	D	D	A	S	A	D	P	L	R	Y	N	L	A	A	M	I	A	R	F	N	E	T	G	R	S
Query Conservation																																											.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.															.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																											.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	K	S	V	G	F	L	L	E	S	L	S	K	N	T	A	N	A	I	A	L	S	A	L	M	S	D	K	E	D	L	L	I	V	T	P	S	D	H	L	I	K	.	.	.	D	L	Q	A	Y	E	N	A	I	K	K	A	I	D	L	A	Q	K	G	F	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	S									S	S														T	S		T	T	S							S	S		B			.	.	.																	T	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																											.	.	.
Template SS confidence
																74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.				.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.						.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.		.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure																																																.	.	.	.	.																	.
Query SS confidence																																																.	.	.	.	.																	.
Query Sequence		Q	V	L	A	K	R	M	P	G	D	L	S	E	Y	S	V	I	Q	T	K	E	P	L	D	R	E	G	K	V	S	R	I	V	E	F	I	E	K	P	D	Q	P	Q	T	L	D	.	.	.	.	.	S	D	I	M	A	V	G	R	Y	V	L	S	A	D	I	W	.	P	E	L	E	R	T	Q	P	G	A	W	G
Query Conservation																																																.	.	.	.	.																	.
Alig confidence																									.	.	.	.	.	.	.																	.	.	.	.	.																	.
Template Conservation																									.	.	.	.	.	.	.
Template Sequence		V	T	F	G	V	S	I	D	K	P	N	T	E	F	G	Y	I	E	S	P	N	G	L	.	.	.	.	.	.	.	D	V	K	R	F	I	E	K	P	S	L	D	K	A	I	E	F	Q	K	S	G	G	F	Y	F	N	S	G	M	F	V	F	Q	A	G	V	F	L	D	E	L	K	K	H	A	P	T	I	L	K
Template Known Secondary structure									S	S			T	T	S						S	S	S	S	.	.	.	.	.	.	.	B		S				S	S
Template Predicted Secondary structure																									.	.	.	.	.	.	.
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.								160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	I	Q	L	T	D	A	I	A	E	L	A	K	K	Q	S	V	D	A	M	L	M	T	G	D	S	Y	D	C	G	K	K	M	G	Y	M	Q	A	F	V	K	Y	G	L
Query Conservation
Alig confidence		.	.	.	.	.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	G	C	E	R	A	F	E	S	L	E	N	A	Y	F	F	E	K	K	I	A	R	L	S	E	K	S	M	Q	D	L	E	D	M	S	I	D	I	A	L
Template Known Secondary structure		.	.	.	.	.								T							S	S												T	T	S									T
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions