Job Description P0AAB6 Confidence 99.82% Date Thu Jan 5 11:12:27 GMT 2012 Rank 56 Aligned Residues 200 % Identity 14% Template c2px7A_ PDB info PDB header:transferase Chain: A: PDB Molecule:2-c-methyl-d-erythritol 4-phosphate PDBTitle: crystal structure of 2-c-methyl-d-erythritol 4-phosphate2 cytidylyltransferase from thermus thermophilus hb8 Resolution 2.20 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	T	N	L	K	A	V	I	P	V	A	G	L	G	M	H	M	L	P	A	T	K	A	I	P	K	E	M	L	P	I	V	D	K	P	M	I	Q	Y	I	V	D	E	I	V	A	A	G	I	K	E	I	L	L	V	T	H	A	S	K	N	A	V	E	N	H	F	D	T	S	Y	E	L	E	S	L	L	E	Q	R
Query Conservation
Alig confidence				.											.	.	.	.	.	.	.	.	.	.	.																																												.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.											.	.	.	.	.	.	.	.	.	.	.																																												.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	E	.	V	S	V	L	I	P	A	A	G	G	.	.	.	.	.	.	.	.	.	.	.	P	K	A	F	L	Q	V	G	G	R	T	L	L	E	W	T	L	A	A	F	R	D	A	A	E	V	L	V	A	L	P	P	G	A	E	P	P	K	G	L	G	A	V	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				.											.	.	.	.	.	.	.	.	.	.	.		G	G	G		B		S	S	S	B									T	T	T		S								T	T					T	T		S			.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure				.											.	.	.	.	.	.	.	.	.	.	.																																												.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.		.	.	.	.	.	.	.	10	.	.												.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		V	K	R	Q	L	L	A	E	V	Q	S	I	C	P	P	G	V	T	I	M	N	V	R	Q	G	E	P	L	G	L	G	H	S	I	L	C	A	R	P	A	I	G	D	N	P	F	V	V	V	L	P	D	V	V	I	D	D	A	S	A	D	P	L	R	Y	N	L	A	A	M	I	A	R	F	N	E	T	G	R	S
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	L	E	G	G	A	T	R	Q	A	S	V	A	R	L	L	E	A	A	S	L	P	L	V	L	V	H	D	V	A	R	.	.	.	.	.	.	P	F	V	S	R	G	L	V	A	R	V	L	E	A	A	Q	R	S	G	A	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						S	S														S	S							T	T		.	.	.	.	.	.																			S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.
Template SS confidence
																								63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.							.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	V	L	A	K	R	M	P	G	D	L	S	E	Y	S	V	I	Q	T	K	E	P	L	D	R	E	G	K	V	S	R	I	V	E	F	I	E	K	P	D	Q	P	Q	T	L	D	S	D	I	M	A	V	G	R	Y	V	L	S	A	D	I	W	P	E	L	E	R	T	Q	P	G	A	W	G	R	I	Q	L	T	D
Query Conservation
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.																.	.
Template Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.																.	.
Template Sequence		V	P	V	L	P	V	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	T	L	M	A	P	E	G	E	A	Y	G	R	V	V	P	R	E	A	F	R	L	V	Q	T	P	.	.	.	.	.	.	.	Q	G	F	F	T	A	L	L	R	E	A	H	A	Y	A	.	.	R	R	K	G	L	E	A	S	D
Template Known Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	S							S	S	S							G	G	G						S		.	.	.	.	.	.	.																.	.				T				S	S
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.																.	.
Template SS confidence
		115	.	.	.	.	120	.															.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.								.	.	150	.	.	.	.	.	.	.	.	.	160	.	.			.	.	.	.	.	.	.	170	.
		241	.	.	.	.	.	.	.	.		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		A	I	A	E	L	A	K	K	Q	.	S	V	D	A	M	L	M	T	G	D	S	Y	D	C	G	K	K	M	G	Y	M	Q	A	F	V	K	Y
Query Conservation											.
Alig confidence											.
Template Conservation
Template Sequence		D	A	Q	L	V	Q	A	L	G	Y	P	V	A	L	V	E	G	E	A	T	A	F	K	I	T	H	P	Q	D	L	V	L	A	E	A	L	A
Template Known Secondary structure									T	T										T	T						S
Template Predicted Secondary structure
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions