Job Description P0AAB6 Confidence 98.47% Date Thu Jan 5 11:12:27 GMT 2012 Rank 68 Aligned Residues 211 % Identity 13% Template c2i5kB_ PDB info PDB header:transferase Chain: B: PDB Molecule:utp--glucose-1-phosphate uridylyltransferase; PDBTitle: crystal structure of ugp1p Resolution 3.10 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.		.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.							.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																																		.																	.	.	.	.	.	.
Query SS confidence																																		.																	.	.	.	.	.	.
Query Sequence		M	T	N	L	K	A	V	I	P	V	A	G	L	G	M	H	M	L	P	A	T	K	A	I	P	K	E	M	L	P	I	V	.	D	K	P	M	I	Q	Y	I	V	D	E	I	V	A	A	G	.	.	.	.	.	.	I	K	E	I	L	L	V	T	H	A	S	K	N	A	V	E	N	H	F	D	T	S	Y	E	L
Query Conservation																																		.																	.	.	.	.	.	.
Alig confidence																				.	.	.												.																	.	.	.	.	.	.
Template Conservation																				.	.	.
Template Sequence		L	S	K	L	A	V	L	K	L	N	G	G	L	G	T	S	M	G	.	.	.	C	V	G	P	K	S	V	I	E	V	R	E	G	N	T	F	L	D	L	S	V	R	Q	I	E	Y	L	N	R	Q	Y	D	S	D	V	P	L	L	L	M	N	S	F	N	T	D	K	D	T	E	H	L	I	K	K	Y	S	A	N
Template Known Secondary structure		G	G	T												G	G	G	T	.	.	.					G	G	G	S				T	T																		T	T											T	T	T									G	G	G	S	S	S
Template Predicted Secondary structure																				.	.	.
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.				.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.			.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.									.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure																										.	.																									.	.	.	.	.	.	.	.
Query SS confidence																										.	.																									.	.	.	.	.	.	.	.
Query Sequence		E	S	L	L	E	Q	R	V	K	R	Q	L	L	A	E	V	Q	S	I	C	P	P	G	V	.	.	T	I	M	N	V	R	Q	G	E	P	L	G	L	G	H	S	I	L	C	A	R	P	A	I	.	.	.	.	.	.	.	.	G	D	N	P	F	V	V	V	L	P	D	V	V	I	D	D	A	S	A	D	P	L
Query Conservation																										.	.																									.	.	.	.	.	.	.	.
Alig confidence																										.	.																									.	.	.	.	.	.	.	.													.							.	.	.
Template Conservation																																																																								.							.	.	.
Template Sequence		R	I	R	I	R	S	F	N	Q	S	R	F	P	R	V	Y	K	D	S	L	L	P	V	P	T	E	Y	D	S	P	L	D	A	W	Y	P	P	G	H	G	D	L	F	E	S	L	H	V	S	G	E	L	D	A	L	I	A	Q	G	R	E	I	L	F	V	S	N	G	D	N	.	L	G	A	T	V	D	.	.	.
Template Known Secondary structure		S	S															T	T	T		S	B				S	T	T	S		G	G	G						T	T	T								T	T								T	T									T	T	B	.	S	S					.	.	.
Template Predicted Secondary structure																																																																								.							.	.	.
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.		.	.	250	.	.	.
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.						.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																													.	.	.	.	.
Query SS confidence																																																													.	.	.	.	.
Query Sequence		R	Y	N	L	A	A	M	I	A	R	F	N	E	T	G	R	S	Q	V	L	A	K	R	M	P	G	D	L	S	E	Y	S	V	I	Q	T	K	E	P	L	D	R	E	G	K	V	S	R	I	V	E	F	I	E	K	P	D	Q	P	.	.	.	.	.	Q	T	L	D	S	D	I	M	A	V	G	R	Y	V	L	S
Query Conservation																																																													.	.	.	.	.
Alig confidence		.	.	.	.																																							.	.	.	.	.													.	.	.	.	.
Template Conservation		.	.	.	.																																							.	.	.	.	.
Template Sequence		.	.	.	.	L	K	I	L	N	H	M	I	E	T	G	A	E	Y	I	M	E	L	T	D	K	T	R	A	D	V	K	G	G	T	L	I	S	Y	D	G	Q	V	.	.	.	.	.	R	L	L	E	V	A	Q	V	P	K	E	H	I	D	E	F	K	N	I	R	K	F	T	N	F	N	T	N	N	L	W	I	N
Template Known Secondary structure		.	.	.	.										T	T		S										T	T		T	T	S							T	T			.	.	.	.	.					G	G	G	S		T	T	T							T	T	T
Template Predicted Secondary structure		.	.	.	.																																							.	.	.	.	.
Template SS confidence
						254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.						.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
		219	220	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	I	W	P	E	L	E	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	K	A	V	K	R	L	I	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		325	.	.	.	.	330	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions