Job Description P0AAB6 Confidence 100.00% Date Thu Jan 5 11:12:27 GMT 2012 Rank 15 Aligned Residues 233 % Identity 21% Template c2cu2A_ PDB info PDB header:transferase Chain: A: PDB Molecule:putative mannose-1-phosphate guanylyl transferase; PDBTitle: crystal structure of mannose-1-phosphate geranyltransferase from2 thermus thermophilus hb8 Resolution 2.20 Å

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		4	.			.	.	.	.	10	.	.	.	.	.	.	.	.	.	20		.	.	.	.	.	.	.	.	.	30	.	.	.		.	.	.	.	.	.	40	.	.	.	.	.	.		.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure				.	.																.														.														.
Query SS confidence				.	.																.														.														.
Query Sequence		L	K	.	.	A	V	I	P	V	A	G	L	G	M	H	M	L	P	A	.	T	K	A	I	P	K	E	M	L	P	I	V	D	.	K	P	M	I	Q	Y	I	V	D	E	I	V	A	.	A	G	I	K	E	I	L	L	V	T	H	A	S	K	N	A	V	E	N	H	F	D	T	S	Y	E	L	E	S	L	L	E
Query Conservation				.	.																.														.														.
Alig confidence				.	.																.														.														.																						.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																							.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	K	T	Y	A	L	V	M	A	G	G	R	G	E	R	L	W	P	L	S	R	E	D	R	P	K	P	F	L	P	L	F	E	G	K	T	L	L	E	A	T	L	E	R	L	A	P	L	V	P	P	E	R	T	L	L	A	V	R	R	D	Q	E	A	V	A	R	P	Y	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure															G	G	G	T	T	T		B	T	T	B		G	G	G		B		G	G	G		B										T	T	T	S		G	G	G							G	G	G					G	G	G	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																							.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.				.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure																																													.	.	.
Query SS confidence																																													.	.	.
Query Sequence		Q	R	V	K	R	Q	L	L	A	E	V	Q	S	I	C	P	P	G	V	T	I	M	N	V	R	Q	G	E	P	L	G	L	G	H	S	I	L	C	A	R	P	A	I	.	.	.	G	D	N	P	F	V	V	V	L	P	D	V	V	I	D	D	A	S	A	D	P	L	R	Y	N	L	A	A	M	I	A	R	F	N
Query Conservation																																													.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.																		.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																															.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	D	G	I	R	L	L	L	E	P	L	G	R	D	T	A	G	A	V	L	L	G	V	A	E	A	L	K	E	G	A	E	R	L	L	V	L	P	A	D	H	Y	V	G	D	D	.	.	.	.	.	.	E	A	Y	R	E	A	L	A	T	M	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S	S						S	S																			T		S							S	S				S			.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																															.	.	.	.	.	.
Template SS confidence
																			70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.							.	.	.	.	120	.	.	.	.	.	.
		156				.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.					.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure			.	.	.																																																	.	.	.	.																			.	.	.	.	.	.
Query SS confidence			.	.	.																																																	.	.	.	.																			.	.	.	.	.	.
Query Sequence		E	.	.	.	T	G	R	S	Q	V	L	A	K	R	M	P	G	D	L	S	E	Y	S	V	I	Q	T	K	E	P	L	D	R	E	G	K	V	S	R	I	V	E	F	I	E	K	P	D	Q	P	Q	T	.	.	.	.	L	D	S	D	I	M	A	V	G	R	Y	V	L	S	A	D	I	W	.	.	.	.	.	.
Query Conservation			.	.	.																																																	.	.	.	.																			.	.	.	.	.	.
Alig confidence			.	.	.																											.	.	.																				.	.	.	.																			.	.	.	.	.	.
Template Conservation																																.	.	.
Template Sequence		E	A	A	E	E	G	F	V	V	A	L	G	L	R	P	T	R	P	E	T	E	Y	G	Y	I	R	L	G	P	R	.	.	.	E	G	A	W	Y	R	G	E	G	F	V	E	K	P	S	Y	A	E	A	L	E	Y	I	R	K	G	Y	V	W	N	G	G	V	F	A	F	A	P	A	T	M	A	E	L	F	R	R
Template Known Secondary structure						T	T										S	S			S	S	S									.	.	.		T	T																						T	T
Template Predicted Secondary structure																																.	.	.
Template SS confidence
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.				.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
				223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.											.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure		.	.																							.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.																							.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	P	E	L	E	R	T	Q	P	G	A	W	G	R	I	Q	L	T	D	A	I	A	E	.	.	.	.	.	.	.	.	.	.	L	A	K	K	Q	S	V	D	A	M	L	M	T	G	D	S	Y	D	C	G	K	K	M	G	Y	M	Q	A	F
Query Conservation		.	.																							.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.																							.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	L	P	S	H	H	E	A	L	E	R	L	L	A	G	A	S	L	E	E	V	Y	A	G	L	P	K	I	S	I	D	Y	G	V	M	E	K	A	E	R	V	R	V	V	L	G	R	F	P	W	D	D	V	G	N	W	R	A	L	E	R	V	F
Template Known Secondary structure															T	T									T	S									T	G	G	G		S	S								S							S	T	T
Template Predicted Secondary structure
Template SS confidence
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions