Job Description P0AAB6 Confidence 100.00% Date Thu Jan 5 11:12:27 GMT 2012 Rank 29 Aligned Residues 221 % Identity 16% Template c1jylC_ PDB info PDB header:transferase Chain: C: PDB Molecule:ctp:phosphocholine cytidylytransferase; PDBTitle: catalytic mechanism of ctp:phosphocholine2 cytidylytransferase from streptococcus pneumoniae (licc) Resolution 2.40 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	T	N	L	K	A	V	I	P	V	A	G	L	G	M	H	M	L	P	A	T	K	A	I	P	K	E	M	L	P	I	V	D	K	P	M	I	Q	Y	I	V	D	E	I	V	A	A	G	I	K	E	I	L	L	V	T	H	A	S	K	N	A	V	E	N	H	F	D	T	S	Y	E	L	E	S	L	L	E	Q	R
Query Conservation
Alig confidence				.																																																																				.	.	.	.	.	.	.	.	.	.
Template Conservation				.																																																																				.	.	.	.	.	.	.	.	.	.
Template Sequence		I	R	.	V	K	A	I	I	L	A	A	G	L	G	T	R	L	R	P	L	T	E	N	T	P	K	A	L	V	Q	V	N	Q	K	P	L	I	E	Y	Q	I	E	F	L	K	E	K	G	I	N	D	I	I	I	I	V	G	Y	L	K	E	Q	F	D	Y	L	K	E	K	Y	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				.									S			G	G	G	T	T	T	T	S	S	S		G	G	G		B	S	S	S	S	B												T	T										T	T	G	G	G	G								.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure				.																																																																				.	.	.	.	.	.	.	.	.	.
Template SS confidence
		4	.		.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		V	K	R	Q	L	L	A	E	V	Q	S	I	C	P	P	G	V	T	I	M	N	V	R	Q	G	E	P	L	G	L	G	H	S	I	L	C	A	R	P	A	I	G	D	N	P	F	V	V	V	L	P	D	V	V	I	D	D	A	S	A	D	P	L	R	Y	N	L	A	A	M	I	A	R	F	N	E	T	G	R	S
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.																						.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.																						.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	V	R	L	V	F	N	D	K	Y	A	D	Y	N	N	F	Y	S	L	Y	L	V	K	E	E	L	.	.	A	N	S	Y	V	I	D	A	D	N	Y	L	F	K	N	M	F	R	N	D	L	.	.	.	.	.	.	.	.	.	.	.	T	R	S	T	Y
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								T	T	T	T	T	S		T							T	G	G	G		.	.	T	T						S	S				S	S					S			.	.	.	.	.	.	.	.	.	.	.		S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.																						.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																	73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.			.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.												120	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220					.	.	.	.	.	.	.		.	.	230	.	.	.	.	.
Predicted Secondary structure																																																														.	.	.	.								.
Query SS confidence																																																														.	.	.	.								.
Query Sequence		Q	V	L	A	K	R	M	P	G	D	L	S	E	Y	S	V	I	Q	T	K	E	P	L	D	R	E	G	K	V	S	R	I	V	E	F	I	E	K	P	D	Q	P	Q	T	L	D	S	D	I	M	A	V	G	R	Y	V	L	S	A	D	.	.	.	.	I	W	P	E	L	E	R	.	T	Q	P	G	A	W	G	R
Query Conservation																																																														.	.	.	.								.
Alig confidence												.	.	.											.	.	.	.	.	.	.										.	.	.	.	.	.																.	.	.	.								.
Template Conservation												.	.	.											.	.	.	.	.	.	.										.	.	.	.	.	.
Template Sequence		F	S	V	Y	R	E	D	C	T	N	.	.	.	E	W	F	L	V	Y	G	D	D	Y	.	.	.	.	.	.	.	K	V	Q	D	I	I	V	D	S	.	.	.	.	.	.	K	A	G	R	I	L	S	G	V	S	F	W	D	A	P	T	A	E	K	I	V	S	F	I	D	K	A	Y	V	S	G	E	F	V	D
Template Known Secondary structure												.	.	.								T	T		.	.	.	.	.	.	.	B									.	.	.	.	.	.								S																							S			S	S
Template Predicted Secondary structure												.	.	.											.	.	.	.	.	.	.										.	.	.	.	.	.
Template SS confidence
		125	.	.	.	.	130	.	.	.	.				.	.	.	.	.	140	.	.	.	.								.	.	.	.	.	150	.	.	.							.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.		.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
Predicted Secondary structure																									.
Query SS confidence																									.
Query Sequence		I	Q	L	T	D	A	I	A	E	L	A	K	K	Q	S	V	D	A	M	L	M	T	G	.	D	S	Y	D	C	G	K	K	M	G	Y	M	Q	A	F	V	K	Y
Query Conservation																									.
Alig confidence																									.
Template Conservation
Template Sequence		L	Y	W	D	N	M	V	K	D	N	I	K	E	L	D	V	Y	V	E	E	L	E	G	N	S	I	Y	E	I	D	S	V	Q	D	Y	R	K	L	E	E	I	L
Template Known Secondary structure				T	T					T	S	G	G	G										S	S						S	S											T
Template Predicted Secondary structure
Template SS confidence
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions