Return to main results Retrieve Phyre Job Id

Job DescriptionP0AED7
Confidence100.00%DateThu Jan 5 11:23:04 GMT 2012
Rank19Aligned Residues341
% Identity18%Templatec3ramC_
PDB info PDB header:hydrolaseChain: C: PDB Molecule:hmra protein; PDBTitle: crystal structure of hmra
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40...... ...50.........60.........70.......
Predicted Secondary structure 












...
















Query SS confidence 













































. . .






























Query Sequence  MSCPVIELTQQLIRRPSLSPDDAGCQALLIERLQAIGFTVERMDFA. . . DTQNFWAWRGQGETLAFAGHTDVVPPGDADR
Query Conservation 
    
  
  
   

 
  
      
   
   
        
...            
 
 
  
 
 

      
Alig confidence 













































...
























......
Template Conservation      

     
   

 
  
      
   
   
  
     
     

        
 
    
 
 

......
Template Sequence  NKYSYIEISHRIHERPELGNEEIFASRTLIDRLKEHDFEIETEIAGHATGFIATYDSGLDGPAIGFLAEYDALP. . . . . .
Template Known Secondary structure  T
S

BTT

TTT
TT
SSSS



B
T......
Template Predicted Secondary structure 






























......
Template SS confidence 















































































   14.....20.........30.........40.........50.........60.........70.........80.......
 
   78.80.........90.........100.........110.........120.........130......... 140.........150......
Predicted Secondary structure 






























.







Query SS confidence 





























































.
















Query Sequence  WINPPFEPTIRDGMLFGRGAADMKGSLAAMVVAAERFVAQHPNHTGRLAFLITSDEEASAHN. GTVKVVEALMARNERLD
Query Conservation      
           
 
  
 
            
          
       

     .                 
Alig confidence  ............






.




..


































.











..


Template Conservation  ............
     
. 
   ..
  
 
   
          
       

    
             ..   
Template Sequence  . . . . . . . . . . . . GLGHACG. HNIIG. . TASVLGAIGLKQVIDQIGGKVVVLGCPAEEGGENGSAKASYVKAGVID. . QID
Template Known Secondary structure  ............TTSSSS
...
S


TT

TT

TGGG..G
S
Template Predicted Secondary structure  ............






.

..



















..


Template SS confidence 















































































   88.90.... ..... 100.........110.........120.........130.........140....... ..150
 
   157..160.........170.........180.........190...... ...200.........210.........220.........230.....
Predicted Secondary structure 
















.















Query SS confidence 







































.






































Query Sequence  YCLVGEPSSIEVVGDVVKNGRRGSLTCNLTIHGVQGHVAY. PHLADNPVHRAAPFLNELVAIEWDQGNEFFPATSMQIAN
Query Conservation    
  
                          
   

  .     


      
  
                     
Alig confidence 








....


























.























....










Template Conservation           ....         
     
   
   

   
  
 


      
  
      ....           
Template Sequence  IALXIHPGN. . . . ETYKTIDTLAVDVLDVKFYGKSAHASENADEALNALDAXISYFNGVAQLRQH. . . . IKKDQRVHGVI
Template Known Secondary structure 

S....SBB



B

B

BTTT
GGG
B
TTS....S
TT
Template Predicted Secondary structure 





....











....




Template SS confidence 















































































   151........ 160.........170.........180.........190.........200.........210. ........220..
 
   236...240.........250.........260.........270....... ..280.........290.........300.........310.
Predicted Secondary structure 









....













Query SS confidence 









































. . . .

































Query Sequence  IQAGTGSNNVIPGELFVQFNFRFSTELTDEMIKAQVLALLEK. . . . HQLRYTVDWWLSGQPFLTARGKLVDAVVNAVEHY
Query Conservation 
       



         
             
      .... 
                                
Alig confidence 




.



































....

































Template Conservation 
 

 .  



  
    
 
    
    
   
       
   
   

            
  
           
Template Sequence  LDGGK. AANIIPDYTHARFYTRAXTRKELDILTEKVNQIARGAAIQTGCDYEFGPIQNGVNEFIKTPKLDDLFAKYAEEV
Template Known Secondary structure 

S.
TTB

SSST
SS

B





T
Template Predicted Secondary structure 


.























Template SS confidence 















































































   223.... ..230.........240.........250.........260.........270.........280.........290.........300.
 
   312.......320.........330.........340 .........350 .........360.........370....
Predicted Secondary structure 











....







......



Query SS confidence 




























. . . .









. . . . . .























Query Sequence  NEIKPQLLTTGGTSDGRFIARMGAQVVEL. . . . GPVNATIHKI. . . . . . NECVNAADLQLLARMYQRIMEQLV
Query Conservation   
         



       
 
    ....

     
  ...... 
 
   

      
   
  
 
Alig confidence 





















.





....









......























Template Conservation 
          

 
    
  .

      
 
      

        
      
   

  
    


Template Sequence  GEAVIDDDFGYGSTDTGNVSHV. VPTIHPHIKIGSRNLVGHTHRFREAAASVHGDEALIKGAKIXALXGLELI
Template Known Secondary structure  T

B

S



B

TTTT.S
B



S
TT

TTSTS
Template Predicted Secondary structure 











.



















Template SS confidence 








































































   302.......310.........320... ......330.........340.........350.........360.........370...
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions