Job Description P0AED7 Confidence 100.00% Date Thu Jan 5 11:23:04 GMT 2012 Rank 21 Aligned Residues 344 % Identity 16% Template c3n5fB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:n-carbamoyl-l-amino acid hydrolase; PDBTitle: crystal structure of l-n-carbamoylase from geobacillus2 stearothermophilus cect43 Resolution 2.75 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.											.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.		.	60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.																																												.
Query SS confidence																.	.	.	.	.	.	.	.	.	.																																												.
Query Sequence		S	C	P	V	I	E	L	T	Q	Q	L	I	R	R	.	.	.	.	.	.	.	.	.	.	P	S	L	S	P	D	D	A	G	C	Q	A	L	L	I	E	R	L	Q	A	I	G	F	T	V	E	R	M	D	F	A	D	T	Q	N	F	W	A	W	R	G	Q	G	.	E	T	L	A	F	A	G	H	T	D	V	V
Query Conservation																.	.	.	.	.	.	.	.	.	.																																												.
Alig confidence																.	.	.	.	.	.	.	.	.	.																																												.
Template Conservation
Template Sequence		G	E	R	L	W	Q	R	L	M	E	L	G	E	V	G	K	Q	P	S	G	G	V	T	R	L	S	F	T	A	E	E	R	R	A	K	D	L	V	A	S	Y	M	R	E	A	G	L	F	V	Y	E	D	A	A	G	N	L	I	G	R	K	E	G	T	N	P	D	A	T	V	V	L	V	G	S	H	L	D	S	V
Template Known Secondary structure													T	T	T	T	B		T	T	S		B				S	S	S																	T	T							T	T										S	S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure																																																																													.	.	.	.	.
Query SS confidence																																																																													.	.	.	.	.
Query Sequence		P	P	G	D	A	D	R	W	I	N	P	P	F	E	P	T	I	R	D	G	M	L	F	G	R	G	A	A	D	M	K	G	S	L	A	A	M	V	V	A	A	E	R	F	V	A	Q	H	P	N	H	T	G	R	L	A	F	L	I	T	S	D	E	E	A	S	A	H	N	G	T	V	K	V	V	.	.	.	.	.
Query Conservation																																																																													.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																			.	.	.	.	.
Template Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	N	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	C	F	D	G	P	L	G	V	L	A	G	V	E	V	V	Q	T	M	N	E	H	G	V	V	T	H	H	P	I	E	V	V	A	F	T	D	E	E	G	A	R	F	R	F	G	M	I	G	S	R	A	M	A	G
Template Known Secondary structure		T	T	B	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S	T	T																	T	T				S	S								S		S	S		T	T	T	S											T
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		84	.	.																							.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
																																			146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.				.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	A	L	M	A	R	N	E	R	L	D	Y	C	L	V	G	E	P	S	S	.	.	.	I	E	V	V	G	D	V	V	K	N	G	R	R	G	S	L	T	C	N	L	T	I	H	G
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.
Template Conservation
Template Sequence		T	L	P	P	E	A	L	E	C	R	D	A	E	G	I	S	L	A	E	A	M	K	Q	A	G	L	D	P	D	R	L	P	Q	A	A	R	K	P	G	T	V	K	A	Y	V	E	L	H	I	E	Q	G	R	V	L	E	E	T	G	L	P	V	G	I	V	T	G	I	A	G	L	I	W	V	K	F	T	I	E	G
Template Known Secondary structure					G	G	G	G	G		B		S	S			B								T	T			G	G	G	G	G	G	G				T	T	S											S	S	S						T		S
Template Predicted Secondary structure
Template SS confidence
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
		190	.	.	.	.	.	.	.			.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure										.	.
Query SS confidence										.	.
Query Sequence		V	Q	G	H	V	A	Y	P	.	.	H	L	A	D	N	P	V	H	R	A	A	P	F	L	N	E	L	V	A	I	E	W	D	Q	G	N	E	F	F	P	A	T	S	M	Q	I	A	N	I	Q	A	G	T	G	S	N	N	V	I	P	G	E	L	F	V	Q	F	N	F	R	F	S	T	E	L	T	D	E	M	I
Query Conservation										.	.
Alig confidence										.	.																								.	.	.	.	.
Template Conservation																																			.	.	.	.	.
Template Sequence		K	A	E	H	A	G	A	T	P	M	S	L	R	R	D	P	M	A	A	A	A	Q	I	I	I	V	I	E	E	E	A	R	R	.	.	.	.	.	T	G	T	T	V	G	T	V	G	Q	L	H	V	Y	P	G	G	I	N	V	I	P	E	R	V	E	F	V	L	D	L	R	D	L	K	A	E	V	R	D	Q	V
Template Known Secondary structure						T	T	T			G	G	G																						.	.	.	.	.	T	S	S												S			T	T				S											S	S
Template Predicted Secondary structure																																			.	.	.	.	.
Template SS confidence
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.						.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
		268	.	270	.	.	.	.	.	.	.	.					.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
Predicted Secondary structure													.	.	.	.
Query SS confidence													.	.	.	.
Query Sequence		K	A	Q	V	L	A	L	L	E	K	H	.	.	.	.	Q	L	R	Y	T	V	D	W	W	L	S	G	Q	P	F	L	T	A	R	G	K	L	V	D	A	V	V	N	A	V	E	H	Y	N	E	I	K	P	Q	L	L	T	T	G	G	T	S	D	G	R	F	I	A	R	M	G	A	Q	V	V	E	L	G	P	V
Query Conservation													.	.	.	.
Alig confidence													.	.	.	.																.																		.
Template Conservation																																.																		.
Template Sequence		W	K	A	I	A	V	R	A	E	T	I	A	K	E	R	N	V	R	V	T	T	E	R	L	Q	E	M	P	P	V	.	L	C	S	D	E	V	K	R	A	A	E	A	A	C	Q	K	L	.	G	Y	P	S	F	W	L	P	S	G	A	A	H	D	S	V	Q	L	A	P	I	C	P	I	G	M	I	F	V	R	S
Template Known Secondary structure																	T															.																		.	T										S			T					T	T	T	S
Template Predicted Secondary structure																																.																		.
Template SS confidence
		297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.		.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.		.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.
			344	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	N	A	T	I	H	K	I	N	E	C	V	N	A	A	D	L	Q	L	L	A	R	M	Y	Q	R	I	M	E	Q	L	V
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		Q	D	G	V	S	H	S	P	A	E	W	S	T	K	E	D	C	A	A	G	A	E	V	L	Y	H	T	V	W	Q	L	A
Template Known Secondary structure		G	G	G			S	S	T	T																							T
Template Predicted Secondary structure
Template SS confidence
		375	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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