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Job DescriptionP0AED7
Confidence100.00%DateThu Jan 5 11:23:04 GMT 2012
Rank8Aligned Residues365
% Identity19%Templatec3mruB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:aminoacyl-histidine dipeptidase; PDBTitle: crystal structure of aminoacylhistidine dipeptidase from vibrio2 alginolyticus
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50..... ....60.........70.......
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Query Sequence  CPVIELTQQLIRRPSLSPDDAGCQALLIERLQAIGFTVERMDFADTQNFWAWR. . . GQGETLAFAGHTDVVPPGDADR. .
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Template Sequence  APLWQFFDKICSIPHPSKHEEALAQYIVTWATEQGFDVRRDPTGNVFIKKPATPGMENKKGVVLQAHIDMVPQKNEDTDH
Template Known Secondary structure  TTS

BTT

TTTT


TTS



SS

SB



B


B
SS


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   14.....20.........30.........40.........50.........60.........70.........80.........90...
 
   78.80.........90.........100.........110.........120.........130.........140.........150......
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Query Sequence  . WINPPFEPTIRDGMLFGRGAADMKGSLAAMVVAAERFVAQHPNHTGRLAFLITSDEEASAHNGTVKVVEALMARNERLD
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Template Sequence  DFTQDPIQPYIDGEWVTAKGTTLG. ADNGIGMASCLAVLASKEIKHGPIEVLLTIDEEAGMTG. . . . . AFGLEAGWLKGD
Template Known Secondary structure 
TTTS


TTSSB


.T
SS


S
S
SSSTT.....S

TTS


S
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   94.....100.........110....... ..120.........130.........140.........150..... ....160.......
 
   157..160....... ..170.........180......... 190........ .200.........210.........
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Query Sequence  YCLVGEPSSIE. . . . . . . . . . . . . . VVGDVVKNGRRGSLTCNLTIHG. VQGHVAYPH. . LADNPVHRAAPFLNELVAIEW
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Template Sequence  ILLNTDSEQEGEVYMGCAGGIDGAMTFDITRDAIPAGFITRQLTLKGLKGGHSGCDIHTGRGNANKLIGRFLAGHAQELD
Template Known Secondary structure 




TT





TT




BTTTGGGS



T
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   168.170.........180.........190.........200.........210.........220.........230.........240.......
 
   220.........230....
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Query Sequence  DQGNEFFPATSMQIA. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  LRLVEFRGGSLRNAIPREAFVTVALPAENQDKLAELFNYYTELLKTELGKIETDIVTFNEEVATDAQVFAIADQQRFIAA
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S
TTB



GGGTTT






S

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   248.250.........260.........270.........280.........290.........300.........310.........320.......
 
   235....240.........250.........260.........270.........280.........290.....
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Query Sequence  . . . . . . . . . . . . . . . . . . . NIQAGTGSNNVIPGELFVQFNFRFSTELTDEMIKAQVLALLEKHQLRYTVDWWLSGQPFLT
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Template Sequence  LNACPNGVMRMSDEVEGVVETSLNVGVITTEENKVTVLCLIRSLIDSGRSQVEGMLQSVAELAGAQIEFSGA. YPGWKPD
Template Known Secondary structure  S

S


SSSTT
TTSSTT
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B


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   328.330.........340.........350.........360.........370.........380.........390......... 400......
 
   296...300.........310.........320.........330... ......340.........350.........360.........370...
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Query Sequence  ARGKLVDAVVNAVEHYNEIKPQLLTTGGTSDGRFIARM. . GAQVVELGPVNATIHKINECVNAADLQLLARMYQRIMEQL
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Template Sequence  ADSEIMAIFRDMYEGIYGHKPNIMVIHAGLECGLFKEPYPNMDMVSFGPTIKFPHSPDEKVKIDTVQLFWDQMVALLEAI
Template Known Secondary structure  SS
TTTTTT

S

SS

GGGGGGSSSS





STTSTT
T
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   407..410.........420.........430.........440.........450.........460.........470.........480......
 
   374
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Query Sequence  V
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Template Sequence  P
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   487
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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