Job Description P0AED7 Confidence 100.00% Date Thu Jan 5 11:23:04 GMT 2012 Rank 17 Aligned Residues 355 % Identity 17% Template c3ifeA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:peptidase t; PDBTitle: 1.55 angstrom resolution crystal structure of peptidase t (pept-1)2 from bacillus anthracis str. 'ames ancestor'. Resolution 1.55 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.											.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.			.	.	.	.	.	60	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.																	.																.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.																	.																.	.
Query Sequence		M	S	C	P	V	I	E	L	T	Q	Q	L	I	R	R	P	S	L	S	P	D	D	A	.	.	.	.	.	.	.	.	.	.	G	C	Q	A	L	L	I	E	R	L	Q	A	I	G	F	T	.	V	E	R	M	D	F	A	D	T	Q	N	F	W	A	W	.	.	R	G	Q	G	E	T	L	A	F	A	G	H	T
Query Conservation																									.	.	.	.	.	.	.	.	.	.																	.																.	.
Alig confidence																									.	.	.	.	.	.	.	.	.	.																	.																.	.
Template Conservation
Template Sequence		M	K	E	E	L	I	E	R	F	T	R	Y	V	K	I	D	T	Q	S	N	E	D	S	H	T	V	P	T	T	P	G	Q	I	E	F	G	K	L	L	V	E	E	L	K	E	V	G	L	T	E	V	T	M	D	D	N	G	Y	V	M	A	T	L	P	A	N	T	D	K	D	V	P	V	I	G	F	L	A	H	L
Template Known Secondary structure															T	S			B			T	T			S	S	S	S	S																		T								T	T	S									B	S	S	S
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		68	.	70	.	.	.	.																											.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.					.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.
Query Sequence		D	V	V	P	P	G	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	D	R	W	I	N	P	P	F	E	P	T	I	R	D	G	M	L	F	G	R	G	A	A	.	.	.	.	D	M	K	G	S	L	A	A	M	V	V	A	A	E	R	F	V	A	Q
Query Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.
Template Conservation
Template Sequence		D	T	A	T	D	F	T	G	K	N	V	K	P	Q	I	H	E	N	F	D	G	N	A	I	T	L	N	E	E	L	N	I	V	L	T	P	E	Q	F	P	E	L	P	S	Y	K	G	H	T	I	I	T	T	D	G	T	T	L	L	G	A	D	D	K	A	G	L	T	E	I	M	V	A	M	N	Y	L	I	H	N
Template Known Secondary structure			B		T	T	S			S	S							T	T			S	S						T	T	T	T					T	T	T		T	T	G	G	G	G	T	T	S							S	S	S																						T
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.		.	.
Predicted Secondary structure																																																																															.
Query SS confidence																																																																															.
Query Sequence		H	P	N	H	T	G	R	L	A	F	L	I	T	S	D	E	E	A	S	A	H	N	G	T	V	K	V	V	E	A	L	M	A	R	N	E	R	L	D	Y	C	L	V	G	E	P	S	S	I	E	V	V	G	D	V	V	K	N	G	R	R	G	S	L	T	C	N	L	T	I	H	G	V	Q	G	H	V	.	A	Y
Query Conservation																																																																															.
Alig confidence																																.	.	.	.	.	.														.	.	.	.																									.
Template Conservation																																.	.	.	.	.	.														.	.	.	.
Template Sequence		P	Q	I	K	H	G	K	I	R	V	A	F	T	P	D	E	E	I	G	R	G	P	A	H	F	D	V	E	A	F	.	.	.	.	.	.	G	A	S	F	A	Y	M	M	D	G	G	P	L	.	.	.	.	G	G	L	E	Y	E	S	F	N	A	A	G	A	K	L	T	F	N	G	T	N	T	H	P	G	T	A
Template Known Secondary structure		T	T	S		B									S		G	G	G	T		T	G	G	G							.	.	.	.	.	.			S									S	T	.	.	.	.	T						B													B				G	G	G
Template Predicted Secondary structure																																.	.	.	.	.	.														.	.	.	.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190							.	.	.	.	.	.	.	.	.	200	.	.	.					.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	H	L	A	D	N	P	V	H	R	A	A	P	F	L	N	E	L	V	A	I	E	W	D	Q	G	N	E	F	F	P	A	T	S	M	Q	I	A	N	I	Q	A	G	T	G	S	N	N	V	I	P	G	E	L	F	V	Q	F	N	F	R	F	S	T	E	L	T	D	E	M	I	K	A	Q	V	L	A	L	L	E
Query Conservation
Alig confidence																																					.	.	.	.	.	.	.	.
Template Conservation																																					.	.	.	.	.	.	.	.
Template Sequence		K	N	K	M	R	N	A	T	K	L	A	M	E	F	N	G	H	L	P	V	E	E	A	P	E	Y	T	E	G	Y	E	G	F	Y	H	.	.	.	.	.	.	.	.	L	L	S	L	N	G	D	V	E	Q	S	K	A	Y	Y	I	I	R	D	F	D	R	K	N	F	E	A	R	K	N	T	I	E	N	I	V	K
Template Known Secondary structure		T	T	T		B												T	S		T	T		S	G	G	G			T	T						.	.	.	.	.	.	.	.								S	S											S	S
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.									.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
									277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.		.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.																			.
Query SS confidence		.	.	.	.	.	.	.																			.
Query Sequence		.	.	.	.	.	.	.	K	H	Q	L	R	Y	T	V	D	W	W	L	S	G	Q	P	F	L	.	T	A	R	G	K	L	V	D	A	V	V	N	A	V	E	H	Y	N	E	I	K	P	Q	L	L	T	T	G	G	T	S	D	G	R	F	I	A	R	M	G	A	Q	V	V	E	L	G	P	V	N	A	T	I	H
Query Conservation		.	.	.	.	.	.	.																			.
Alig confidence		.	.	.	.	.	.	.																			.																		.
Template Conservation																																													.
Template Sequence		Q	M	Q	E	K	Y	G	Q	D	A	V	V	L	E	M	N	D	Q	Y	Y	N	M	L	E	K	I	E	P	V	R	E	I	V	D	I	A	Y	E	A	M	K	S	L	.	N	I	E	P	N	I	H	P	I	R	G	G	T	D	G	S	Q	L	S	Y	M	G	L	P	T	P	N	I	F	T	G	G	E	N	Y	H
Template Known Secondary structure									G	G	G												T					G	G	G	T													T	.	T								B	S	S										T	T									S			S	T	T
Template Predicted Secondary structure																																													.
Template SS confidence
		303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.		.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.
		349	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	I	N	E	C	V	N	A	A	D	L	Q	L	L	A	R	M	Y	Q	R	I	M	E	Q	L	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	K	F	E	Y	V	S	V	D	V	M	E	K	A	V	Q	V	I	I	E	I	A	R	R	F	E
Template Known Secondary structure		S	T	T
Template Predicted Secondary structure
Template SS confidence
		382	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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