Phyre 2 alignment of P0AED7 with c2q43A

Job Description P0AED7
Confidence 100.00% Date Thu Jan 5 11:23:04 GMT 2012

Rank 26 Aligned Residues 346

% Identity 14% Template c2q43A_

PDB info PDB header:hydrolase Chain: A: PDB Molecule:iaa-amino acid hydrolase ilr1-like 2; PDBTitle: ensemble refinement of the protein crystal structure of iaa-aminoacid2 hydrolase from arabidopsis thaliana gene at5g56660

Resolution 2.00 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence	M	S	C	P	V	I	E	L	T	Q	Q	L	I	R	R	P	S	L	S	P	D	D	A	G	C	Q	A	L	L	I	E	R	L	Q	A	I	G	F	T	V	E	R	M	D	F	A	D	T	Q	N	F	W	A	W	R	G	Q	G	E	T	L	A	F	A	G	H	T	D	V	V	P	P	G	D	A	D	R	W	I	N
Query Conservation
Alig confidence																																																																											.	.	.
Template Conservation																																																																											.	.	.
Template Sequence	V	F	D	W	M	V	K	I	R	R	K	I	H	E	N	P	E	L	G	Y	E	E	L	E	T	S	K	L	I	R	S	E	L	E	L	I	G	I	K	Y	R	Y	P	V	A	I	T	G	V	I	G	Y	I	G	T	G	E	P	P	F	V	A	L	R	A	D	M	D	A	L	P	I	Q	E	.	.	.	G	V	E
Template Known Secondary structure															S				T	T																	T								T	T	T								S	S	S	S												B	S				.	.	.
Template Predicted Secondary structure																																																																											.	.	.
Template SS confidence
	26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.				100	.	.

	81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence	P	P	F	E	P	T	I	R	D	G	M	L	F	G	R	G	A	A	D	M	K	G	S	L	A	A	M	V	V	A	A	E	R	F	V	A	Q	H	P	N	H	T	G	R	L	A	F	L	I	T	S	D	E	E	A	S	A	H	N	G	T	V	K	V	V	E	A	L	M	A	R	N	E	R	L	D	Y	C	L	V
Query Conservation
Alig confidence								.									.	.	.																																							.	.
Template Conservation								.									.	.	.																																							.	.
Template Sequence	W	E	H	K	S	K	I	.	A	G	K	M	H	A	C	G	.	.	.	H	D	G	H	V	T	M	L	L	G	A	A	K	I	L	H	E	H	R	H	H	L	Q	G	T	V	V	L	I	F	Q	P	A	E	E	G	L	S	.	.	G	A	K	K	M	R	E	E	G	A	L	K	N	V	E	A	I	F	G	I	H
Template Known Secondary structure	S	T	T	S		S	S	.	T	T		B		T	T	S	.	.	.																		T	G	G	G		S	S										T	T	T	T		.	.								T	T	T	T	T	T
Template Predicted Secondary structure								.									.	.	.																																							.	.
Template SS confidence
	103	.	.	.	.	.	.		110	.	.	.	.	.	.	.				.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.			.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.

	161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence	G	E	P	S	S	I	E	V	V	G	D	V	V	K	N	G	R	R	G	S	L	T	C	N	L	T	I	H	G	V	Q	G	H	V	A	Y	P	H	L	A	D	N	P	V	H	R	A	A	P	F	L	N	E	L	V	A	I	E	W	D	Q	G	N	E	F	F	P	A	T	S	M	Q	I	A	N	I	Q	A	G	T
Query Conservation
Alig confidence				.	.	.	.	.	.	.	.																																																												.	.	.	.	.	.	.	.	.	.
Template Conservation				.	.	.	.	.	.	.	.																																																												.	.	.	.	.	.	.	.	.	.
Template Sequence	L	S	A	.	.	.	.	.	.	.	.	R	I	P	F	G	K	A	A	S	R	A	G	S	F	L	A	G	A	G	V	F	E	A	V	I	T	G	K	T	I	D	P	V	V	A	A	S	S	I	V	L	S	L	Q	Q	L	V	S	R	E	T	D	P	L	D	S	K	V	V	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				.	.	.	.	.	.	.	.				T	T						S							B																														B			S	S	T	T	S					.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure				.	.	.	.	.	.	.	.																																																												.	.	.	.	.	.	.	.	.	.
Template SS confidence
	177	.	.									180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.

	241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.			.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.				290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure																								.	.																											.	.	.
Query SS confidence																								.	.																											.	.	.
Query Sequence	G	S	N	N	V	I	P	G	E	L	F	V	Q	F	N	F	R	F	S	T	E	L	T	.	.	D	E	M	I	K	A	Q	V	L	A	L	L	E	K	H	Q	L	R	Y	T	V	D	W	W	L	S	.	.	.	G	Q	P	F	L	T	A	R	G	K	L	V	D	A	V	V	N	A	V	E	H	Y	N	E	I	K
Query Conservation																								.	.																											.	.	.
Alig confidence																								.	.																											.	.	.
Template Conservation
Template Sequence	T	V	S	K	V	N	P	D	S	I	T	I	G	G	T	L	R	A	F	T	G	F	T	Q	L	Q	Q	R	V	K	E	V	I	T	K	Q	A	A	V	H	R	C	N	A	S	V	N	L	T	P	N	G	R	E	P	M	P	P	T	V	N	N	K	D	L	Y	K	Q	F	K	K	V	V	R	D	L	L	G	Q	E
Template Known Secondary structure																			S	S																			T	T	T							S	S	G	G	G				B																					T		T	T
Template Predicted Secondary structure
Template SS confidence
	248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.

			316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.								.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.
Predicted Secondary structure	.	.																																	.	.	.	.	.	.	.
Query SS confidence	.	.																																	.	.	.	.	.	.	.
Query Sequence	.	.	P	Q	L	L	T	T	G	G	T	S	D	G	R	F	I	A	R	M	G	A	Q	V	V	E	L	G	P	V	N	A	T	I	.	.	.	.	.	.	.	H	K	I	N	E	C	V	N	A	A	D	L	Q	L	L	A	R	M	Y	Q	R	I	M	E	Q	L	V
Query Conservation	.	.																																	.	.	.	.	.	.	.
Alig confidence	.	.																			.														.	.	.	.	.	.	.
Template Conservation																					.
Template Sequence	A	F	V	E	A	A	P	V	M	G	S	E	D	F	S	Y	F	A	E	T	.	I	P	G	H	F	S	L	L	G	M	Q	D	E	T	N	G	Y	A	S	S	H	S	P	L	Y	R	I	N	E	D	V	L	P	Y	G	A	A	I	H	A	S	M	A	V	Q	Y	L
Template Known Secondary structure	T							B					T	T					T	T	.	T	T											T	T			S			S	S	S	T	T					G	G	G
Template Predicted Secondary structure																					.
Template SS confidence
	336	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.		.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
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