Job Description P0AED7 Confidence 100.00% Date Thu Jan 5 11:23:04 GMT 2012 Rank 24 Aligned Residues 347 % Identity 19% Template c2imoA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:allantoate amidohydrolase; PDBTitle: crystal structure of allantoate amidohydrolase from escherichia coli2 at ph 4.6 Resolution 2.80 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.							.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.		.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.																																									.
Query SS confidence																				.	.	.	.	.	.																																									.
Query Sequence		M	S	C	P	V	I	E	L	T	Q	Q	L	I	R	R	P	S	L	.	.	.	.	.	.	S	P	D	D	A	G	C	Q	A	L	L	I	E	R	L	Q	A	I	G	F	T	V	E	R	M	D	F	A	D	T	Q	N	F	W	A	W	R	G	Q	G	.	E	T	L	A	F	A	G	H	T	D	V	V	P	P	G
Query Conservation																				.	.	.	.	.	.																																									.
Alig confidence																				.	.	.	.	.	.																																									.
Template Conservation
Template Sequence		F	R	Q	A	I	E	E	T	L	P	W	L	S	S	F	G	A	D	X	T	R	L	L	Y	S	P	E	W	L	E	T	Q	Q	Q	F	K	K	R	X	A	A	S	G	L	E	T	R	F	D	E	V	G	N	L	Y	G	R	L	N	G	T	E	Y	P	Q	E	V	V	L	S	G	S	H	I	D	T	V	V	N	G
Template Known Secondary structure															T	S	S							T	T	S																	T	T							T	T							B			S	S		T	T													T	T
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																													.	.	.	.	.
Query SS confidence																																																																													.	.	.	.	.
Query Sequence		D	A	D	R	W	I	N	P	P	F	E	P	T	I	R	D	G	M	L	F	G	R	G	A	A	D	M	K	G	S	L	A	A	M	V	V	A	A	E	R	F	V	A	Q	H	P	N	H	T	G	R	L	A	F	L	I	T	S	D	E	E	A	S	A	H	N	G	T	V	K	V	V	E	A	L	.	.	.	.	.
Query Conservation																																																																													.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																						.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	N	L	D	G	Q	F	G	A	L	A	A	W	L	A	I	D	W	L	K	T	Q	Y	G	A	P	L	R	T	V	E	V	V	A	X	A	E	E	E	G	S	R	F	P	Y	V	F	W	G	S	K	N	I	F	G	L	A	N
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S	T	T																				S		S	S								S			S			S	S	S		S		T	T	T	T	G	G	G	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																								91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
																										149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.				.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.			.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.																																	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.																																	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	A	R	N	E	R	L	D	Y	C	L	V	G	E	P	S	S	.	.	.	I	E	V	V	G	D	V	V	K	N	G	R	R	G	S	L	T	C	N	L	T	I	H	G	V	Q	G	H	V	A	Y	P	.	.	H	L
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.																																	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.																																	.	.
Template Conservation
Template Sequence		P	D	D	V	N	S	F	V	D	A	X	K	A	C	G	F	T	L	P	N	A	P	L	T	P	R	Q	D	I	K	A	F	V	E	L	H	I	E	Q	G	C	V	L	E	S	N	G	Q	S	I	G	V	V	N	A	I	V	G	Q	R	R	Y	T	V	T	L	N	G	E	S	N	H	A	G	T	T	P	X	G	Y
Template Known Secondary structure		G	G	G											T	T					S	S																		S	S	S						T		S																								S	S	S	S		T	T	S
Template Predicted Secondary structure
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
Predicted Secondary structure																																																																															.	.	.
Query SS confidence																																																																															.	.	.
Query Sequence		A	D	N	P	V	H	R	A	A	P	F	L	N	E	L	V	A	I	E	W	D	Q	G	N	E	F	F	P	A	T	S	M	Q	I	A	N	I	Q	A	G	T	G	S	N	N	V	I	P	G	E	L	F	V	Q	F	N	F	R	F	S	T	E	L	T	D	E	M	I	K	A	Q	V	L	A	L	L	E	.	.	.
Query Conservation																																																																															.	.	.
Alig confidence																											.	.	.	.																																																	.	.	.
Template Conservation																											.	.	.	.
Template Sequence		R	R	D	T	V	Y	A	F	S	R	I	C	H	Q	S	V	E	K	A	K	R	X	G	D	P	.	.	.	.	L	V	L	T	F	G	K	V	E	P	R	P	N	T	V	N	V	V	P	G	K	T	T	F	T	I	D	C	R	H	T	D	A	A	V	L	R	D	F	T	Q	Q	L	E	N	D	X	R	A	I	C
Template Known Secondary structure																									T	T	.	.	.	.												S			T	T															S	S
Template Predicted Secondary structure																											.	.	.	.
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.					.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
			277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.		.	.	.	.	.	.	350	.	.	.	.
Predicted Secondary structure		.																																																																				.
Query SS confidence		.																																																																				.
Query Sequence		.	K	H	Q	L	R	Y	T	V	D	W	W	L	S	G	Q	P	F	L	T	A	R	G	K	L	V	D	A	V	V	N	A	V	E	H	Y	N	E	I	K	P	Q	L	L	T	T	G	G	T	S	D	G	R	F	I	A	R	M	G	A	Q	V	V	E	L	G	P	V	.	N	A	T	I	H	K	I	N	E	C	V
Query Conservation		.																																																																				.
Alig confidence		.																	.																		.																																	.
Template Conservation																			.																		.
Template Sequence		D	E	X	D	I	G	I	D	I	D	L	W	X	D	E	E	P	.	V	P	X	N	K	E	L	V	A	T	L	T	E	L	C	E	R	.	E	K	L	N	Y	R	V	X	H	S	G	A	G	H	D	A	Q	I	F	A	P	R	V	P	T	C	X	I	F	I	P	S	I	N	G	I	S	H	N	P	A	E	R	T
Template Known Secondary structure				T	T														.																		.	T	T								B	S	S			T					T	T	T	S										G	G	G			S	S	T	T
Template Predicted Secondary structure																			.																		.
Template SS confidence
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.		.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390
		355	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	A	A	D	L	Q	L	L	A	R	M	Y	Q	R	I	M	E	Q	L	V	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	I	T	D	L	A	E	G	V	K	T	L	A	L	X	L	Y	Q	L	A	W
Template Known Secondary structure																						S
Template Predicted Secondary structure
Template SS confidence
		391	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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