 |
Job Description | P0AED7 | Confidence | 98.42% | Date | Thu Jan 5 11:23:04 GMT 2012 |
Rank | 79 | Aligned Residues | 76 |
% Identity | 18% | Template | c2gljR_ |
PDB info |
PDB header:hydrolase | Chain: R: PDB Molecule: |
PDBTitle: crystal structure of aminopeptidase i from clostridium2 acetobutylicum
|
Resolution | 3.20 Å |
|
 |
  |   |
295 | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | |
|
|
|
|
|
. | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  | . | . | . | . | . | . |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | A | R | G | K | L | V | D | A | V | V | N | A | V | E | H | Y | N | E | I | K | P | Q | L | L | T | T | . |
. |
. |
. |
. |
. |
G | G | T | S | D | G | R | F | I | A | R | M | G | A | Q | V | V | E | L | G | P | V | N | A | T | I | H | K | I | N | E | C | V | N | A | A | D | L | Q | L | L | A | R | M | Y | Q | R |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   | . | . | . | . | . | . |   |
|
|
|
|   |   |   |   |   |   |   |
|   |
|   |   |   |   |
|
|   |   |   |   |   |
|   |   |   |
|   |
|   |   |   |
|
|   |   |   |   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   | . |   |   |
|
|   |
|   |   |   |   |   |
|   |
|   |   |
|
|
|
|
|
|   |
|   |
|   |   |
|
|   |
|
|
|
|
|
|
|   |
|   |
|
|
|   |
|
|   |   |   |   |   |
|
|   |   |   |   |   |
|   |   |
|
Template Sequence |   |
D | A | N | P | E | Y | I | A | E | L | R | R | I | L | S | K | . |
E | S | V | N | W | Q | T | A | E | L | G | K | V | D | Q | G | G | G | G | T | I | A | Y | I | L | A | E | Y | G | M | Q | V | I | D | C | G | V | A | L | L | N | X | H | A | P | W | E | I | S | S | K | A | D | I | Y | E | T | K | N | G | Y | S | A |
Template Known Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | . | T |
|
|
|  |  |  |
|
| S | S | S | S | S | S | S |
|
|
|
| T |  |  |  |  |  | T | T | T |
| B |
|
| B | B |
|
|  |  |  | S | T | T | S | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | . |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
383 | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | |
. | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . |
  |
  |   |
369 | 370 | . |
Predicted Secondary structure |   |
 |  |  |
Query SS confidence |   |
|
|
|
Query Sequence |   |
I | M | E |
Query Conservation |   |
  |
|   |
Alig confidence |   |
|
|
|
Template Conservation |   |
|   |   |
Template Sequence |   |
F | L | N |
Template Known Secondary structure |   |
T | S |
|
Template Predicted Secondary structure |   |
 |  |
|
Template SS confidence |   |
|
|
|
  |   |
462 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|