Job Description P0AED7 Confidence 99.37% Date Thu Jan 5 11:23:04 GMT 2012 Rank 62 Aligned Residues 356 % Identity 14% Template c2glfB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:probable m18-family aminopeptidase 1; PDBTitle: crystal structure of aminipeptidase (m18 family) from thermotoga2 maritima Resolution 2.80 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.															.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.		.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Query SS confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Query Sequence		S	C	P	V	I	E	L	T	Q	Q	L	I	R	R	P	S	L	S	P	D	D	A	G	C	Q	A	L	L	I	E	R	L	Q	A	I	G	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	V	E	R	M	D	F	A	D	T	Q	N	F	W	A	W	R	G	Q	G	E	T	L	.	A	F	A	G	H
Query Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Alig confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Template Conservation
Template Sequence		K	E	E	I	E	A	F	S	K	E	Y	X	E	F	X	S	K	A	K	T	E	R	X	T	V	K	E	I	K	R	I	L	D	E	S	G	F	V	P	L	E	D	F	A	G	D	P	X	N	X	T	V	Y	A	V	N	R	G	K	A	I	A	A	F	R	V	V	D	D	L	K	R	G	L	N	L	V	V	A	H
Template Known Secondary structure																	T	T		S	S															T	T				G	G	G			S		T	T	S							S	S	S	S									S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
		67	.	.	70	.	.																								.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.						.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.
Query Sequence		T	D	V	V	P	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	D	A	D	R	W	I	N	P	P	F	E	P	T	I	R	D	G	M	L	F	G	R	G	A	A	.	.	.	.	.	D	M	K	G	S	L	A	A	M	V	V	A	A	E	R	F	V	A	Q	H
Query Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.
Template Conservation
Template Sequence		I	D	S	P	R	L	D	F	K	P	N	P	L	I	E	D	E	Q	I	A	L	F	K	T	H	Y	Y	G	G	I	K	K	Y	H	W	L	S	I	P	L	E	I	H	G	V	L	F	K	N	D	G	T	E	I	E	I	H	I	G	D	K	P	E	D	P	V	F	T	I	P	D	L	L	P	H	L	D	K	E	D
Template Known Secondary structure																	S	S	S										S	S			G	G	G	G	T	T	S											T	T	S								S	S	S	T	T	S			B							T	T	T
Template Predicted Secondary structure
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
									119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150		.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure		.	.	.	.	.	.	.																																	.
Query SS confidence		.	.	.	.	.	.	.																																	.
Query Sequence		.	.	.	.	.	.	.	P	N	H	T	G	R	L	A	F	L	I	T	S	D	E	E	A	S	A	H	N	G	T	V	K	V	V	E	A	L	M	A	.	R	N	E	R	L	D	Y	C	L	V	G	E	P	S	S	I	E	V	V	G	D	V	V	K	N	G	R	R	G	S	L	T	C	N	L	T	I	H	G	V
Query Conservation		.	.	.	.	.	.	.																																	.
Alig confidence		.	.	.	.	.	.	.																																	.																																		.	.	.	.	.	.	.
Template Conservation																																																																											.	.	.	.	.	.	.
Template Sequence		A	K	I	S	E	K	F	K	G	E	N	L	X	L	I	A	G	T	I	P	L	S	G	E	E	K	E	A	V	K	T	N	V	L	K	I	L	N	E	X	Y	G	I	T	E	E	D	F	V	S	G	E	I	E	V	V	P	A	F	S	P	R	E	V	G	X	D	R	S	L	I	G	A	.	.	.	.	.	.	.
Template Known Secondary structure				T	T	S	S	S		G	G	G											T	T		S	S																			G	G	G	G	T	T															S	S	S							.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																											.	.	.	.	.	.	.
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	G	H	V	A	Y	P	H	L	A	D	N	P	V	H	R	A	A	P	F	L	N	E	L	V	A	I	E	W	D	Q	G	N	E	F	F	P	A	T	S	M	Q	I	A	N	I	Q	A	G	T	G	S	N	N	V	I	P	G	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	Y	G	Q	D	D	R	I	C	A	Y	T	A	L	R	A	L	L	S	A	N	P	E	K	S	I	G	V	I	F	F	D	K	E	E	I	G	S	D	G	N	T	G	A	K	A	R	F	Y	L	K	A	L	R	Q	I	L	K	X	Q	G	A	K	D	S	E	F	V	L	D	E	V	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	T	T																				S	S								S	S	G	G	G	T	S		S	T	T	S	T	T	S	S													T	T		S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.
Template SS confidence
										248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
					250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.		.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure		.	.	.																																			.																																							.	.	.	.
Query SS confidence		.	.	.																																			.																																							.	.	.	.
Query Sequence		.	.	.	L	F	V	Q	F	N	F	R	F	S	T	E	L	T	D	E	M	I	K	A	Q	V	L	A	L	L	E	K	H	Q	L	R	Y	T	.	V	D	W	W	L	S	G	Q	P	F	L	T	A	R	G	K	L	V	D	A	V	V	N	A	V	E	H	Y	N	E	I	K	P	Q	L	L	T	T	.	.	.	.
Query Conservation		.	.	.																																			.																																							.	.	.	.
Alig confidence		.	.	.																																			.																												.											.	.	.	.
Template Conservation																																																																			.
Template Sequence		E	N	T	S	V	I	S	G	D	V	C	A	A	V	N	P	P	Y	K	D	V	H	D	L	H	N	A	P	K	L	G	Y	G	V	A	L	V	K	Y	T	G	A	R	G	K	Y	S	T	N	D	A	H	A	E	F	V	A	R	V	R	K	V	L	N	E	.	Q	G	V	I	W	Q	V	A	T	L	G	K	V	D
Template Known Secondary structure			S														G	G	G	G	G	G	S		G	G	G				T	T	S						S				S	T	T	T	T	T																			.	T	T								S	S	S	T	T
Template Predicted Secondary structure																																																																			.
Template SS confidence
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.		.	.	.	.	.	390	.	.	.	.	.	.	.	.
				322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	G	G	T	S	D	G	R	F	I	A	R	M	G	A	Q	V	V	E	L	G	P	V	N	A	T	I	H	K	I	N	E	C	V	N	A	A	D	L	Q	L	L	A	R	M	Y	Q	R	I	M	E	Q	L
Query Conservation		.	.
Alig confidence		.	.
Template Conservation
Template Sequence		Q	G	G	G	G	T	I	A	K	F	F	A	E	R	G	S	D	V	I	D	X	G	P	A	L	L	G	X	H	S	P	F	E	I	S	S	K	A	D	L	F	E	T	Y	V	A	Y	R	S	L	X	E	K	L
Template Known Secondary structure		S						T						T	T	T											B	S	T	T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		399	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.