Job Description P0AED7 Confidence 98.89% Date Thu Jan 5 11:23:04 GMT 2012 Rank 72 Aligned Residues 195 % Identity 19% Template c2ek8A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:aminopeptidase; PDBTitle: aminopeptidase from aneurinibacillus sp. strain am-1 Resolution 1.80 Å

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		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.					.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure																			.	.	.	.
Query SS confidence																			.	.	.	.
Query Sequence		T	V	E	R	M	D	F	A	D	T	Q	N	F	W	A	W	R	.	.	.	.	G	Q	G	E	T	L	A	F	A	G	H	T	D	V	V	P	P	G	D	A	D	R	W	I	N	P	P	F	E	P	T	I	R	D	G	M	L	F	G	R	G	A	A	D	M	K	G	S	L	A	A	M	V	V	A	A	E	R	F
Query Conservation																			.	.	.	.
Alig confidence																			.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	V	K	T	L	T	S	H	N	V	I	A	T	K	K	P	D	A	N	K	K	N	T	N	D	I	I	I	I	G	S	H	H	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	V	E	K	A	P	G	A	N	D	D	A	S	G	V	A	V	T	L	E	L	A	R	V	M
Template Known Secondary structure																			S	S	T	T														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T				T	T	T	T
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230																						.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	Q	H	P	N	H	T	G	R	L	A	F	L	I	T	S	D	E	E	A	S	A	H	N	G	T	V	K	V	V	E	A	L	M	A	R	N	E	R	L	D	Y	C	L	V	G	E	P	S	S	I	E	V	V	G	D	V	V	K	N	G	R	R	G	S	L	T	C	N	L	T	I	H	G	V	Q	G	H	V
Query Conservation
Alig confidence					.	.																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation					.	.																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	K	L	.	.	K	T	D	T	E	L	R	F	I	T	F	G	A	E	E	N	G	L	I	G	S	K	K	Y	A	A	S	L	S	E	D	E	I	K	R	T	I	G	M	F	Q	L	D	M	V	G	S	K	D	A	G	D	L	I	M	Y	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T	T	S	.	.			S	S								S	S	S	T	T	T	S								T	T																	S			B	T	T	S								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure					.	.																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		256	.	.			.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Y	P	H	L	A	D	N	P	V	H	R	A	A	P	F	L	N	E	L	V	A	I	E	W	D	Q	G	N	E	F	F	P	A	T	S	M	Q	I	A	N	I	Q	A	G	T	G	S	N	N	V	I	P	G	E	L	F	V	Q	F	N	F	R	F	S	T	E	L	T	D	E	M	I	K	A	Q	V	L	A	L
Query Conservation
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340			.	.	.	.	.	.	.	.	.	350
Predicted Secondary structure																																																																				.	.											.	.
Query SS confidence																																																																				.	.											.	.
Query Sequence		L	E	K	H	Q	L	R	Y	T	V	D	W	W	L	S	G	Q	P	F	L	T	A	R	G	K	L	V	D	A	V	V	N	A	V	E	H	Y	N	E	I	K	P	Q	L	L	T	T	G	G	T	S	D	G	R	F	I	A	R	M	G	A	Q	V	V	E	L	.	.	G	P	V	N	A	T	I	H	K	I	.	.
Query Conservation																																																																				.	.											.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.																														.	.											.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	D	G	K	K	N	R	V	T	D	L	G	A	A	A	S	S	.	R	L	S	G	V	L	P	Y	G	Q	E	G	R	S	D	H	E	S	F	H	A	L	G	I	P	A	A	L	F	I	H	A	P	V	E	P	W	Y	H	T	P	N	D
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	S															.			T	S									S	S	T						T	T	T										S			T	T	T	T	S	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Template SS confidence
																					316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.		.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.
			351	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	N	E	C	V	N	A	A	D	L	Q	L	L	A	R	M	Y	Q	R	I	M	E	Q	L	V
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		T	L	D	K	I	S	K	E	K	L	D	N	V	A	D	I	V	G	S	A	V	Y	Q	A	A
Template Known Secondary structure			G	G	G	B
Template Predicted Secondary structure
Template SS confidence
		376	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions