Job Description P0AED7 Confidence 100.00% Date Thu Jan 5 11:23:04 GMT 2012 Rank 31 Aligned Residues 329 % Identity 13% Template c2cf4A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:protein ph0519; PDBTitle: pyrococcus horikoshii tet1 peptidase can assemble into a2 tetrahedron or a large octahedral shell Resolution 3.08 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	E	L	T	Q	Q	L	I	R	R	P	S	L	S	P	D	D	A	G	C	Q	A	L	L	I	E	R	L	Q	A	I	G	F	T	V	E	R	M	D	F	A	D	T	Q	N	F	W	A	W	R	G	Q	G	E	T	L	A	F	A	G	H	T	D	V	V	P	P	G	D	A	D	R	W	I	N	P	P	F	E
Query Conservation
Alig confidence																																			.															.	.																														.
Template Conservation																																			.															.	.																														.
Template Sequence		X	I	E	K	L	K	K	F	T	Q	I	P	G	I	S	G	Y	E	E	R	I	R	E	E	I	I	R	E	I	K	D	F	A	.	D	Y	K	V	D	A	I	G	N	L	I	V	E	L	.	.	G	E	G	E	E	R	I	L	F	X	A	H	X	D	E	I	G	L	L	I	T	G	I	T	D	E	G	K	L	.
Template Known Secondary structure												S				T	T												T	T	T	T	S	S	.						S	S	S							.	.	S		S	S																					T	T	S			.
Template Predicted Secondary structure																																			.															.	.																														.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.		.	.	.	.	40	.	.	.	.	.	.	.	.	.			50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	T	I	R	D	G	M	L	F	G	R	G	A	A	D	M	K	G	S	L	A	A	M	V	V	A	A	E	R	F	V	A	Q	H	P	N	H	T	G	R	L	A	F	L	I	T	S	D	E	E	A	S	A	H	N	G	T	V	K	V	V	E	A	L	M	A	R	N	E	R	L	D	Y	C	L	V	G	E	P	S
Query Conservation
Alig confidence		.	.	.	.	.	.																	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.																	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	R	F	R	K	V	G	G	I	D	D	R	L	L	Y	G	R	.	.	.	.	.	.	H	V	N	V	V	T	E	K	G	I	L	D	G	V	I	G	A	T	P	P	H	L	S	L	E	R	D	K	.	.	.	.	.	.	.	.	.	S	V	I	P	W	Y	D	L	V	I	D	I	G	A	E
Template Known Secondary structure		.	.	.	.	.	.						S				G	G	G	T	T	T		.	.	.	.	.	.							S	S													S	S		S	S				.	.	.	.	.	.	.	.	.	S				T	T	S			B	B				S
Template Predicted Secondary structure		.	.	.	.	.	.																	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.
Template SS confidence
								79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.							.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.										.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	I	E	V	V	G	D	V	V	K	N	G	R	R	G	S	L	T	C	N	L	T	I	H	G	V	Q	G	H	V	A	Y	P	H	L	A	D	N	P	V	H	R	A	A	P	F	L	N	E	L	V	A	I	E	W	D	Q	G	N	E	F	F	P	A	T	S	M	Q	I	A	N	I	Q	A	G	T	G	S	N	N
Query Conservation
Alig confidence																																																							.
Template Conservation																																																							.
Template Sequence		S	K	E	E	A	L	E	L	V	K	P	L	D	F	A	V	F	K	K	H	F	S	V	L	N	G	K	Y	V	S	T	R	G	L	D	D	R	F	G	V	V	A	L	I	E	A	I	K	D	L	V	D	H	.	E	L	E	G	K	V	I	F	A	F	T	V	Q	E	E	V	G	L	K	G	A	K	F	L	A	N
Template Known Secondary structure		S						T	T			T	T													S	S	S					T	T																S	S	G	G	G	.			S	S								S	S		T	T	T	S							T	T
Template Predicted Secondary structure																																																							.
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190		.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	P	G	E	L	F	V	Q	F	N	F	R	F	S	T	E	L	T	D	E	M	I	K	A	Q	V	L	A	L	L	E	K	H	Q	L	R	Y	T	V	D	W	W	L	S	G	Q	P	F	L	T	A	R	G	K	L	V	D	A	V	V	N	A	V	E	H	Y	N	E	I	K	P	Q	L	L	T	T	G	G	T
Query Conservation
Alig confidence																									.	.	.	.	.	.	.	.	.																		.	.	.															.
Template Conservation																									.	.	.	.	.	.	.	.	.																		.	.	.															.
Template Sequence		H	Y	Y	P	Q	Y	A	F	A	I	D	S	F	A	C	C	S	P	L	T	G	D	V	.	.	.	.	.	.	.	.	.	K	L	G	K	G	P	V	I	R	A	V	D	N	S	A	I	Y	.	.	.	S	R	D	L	A	R	K	V	W	S	I	A	E	K	.	N	G	I	E	I	Q	I	G	V	T	G	G	G
Template Known Secondary structure		T				S	S										S	S	S	S	S	T	T		.	.	.	.	.	.	.	.	.		T	T	S									S	S		B		.	.	.														T	.	T	T									S	S
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.																		.	.	.															.
Template SS confidence
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.										240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.				.	.	.	260	.	.	.	.	.	.	.	.	.	270		.	.	.	.	.	.	.	.	.	280	.	.	.
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	D	G	R	F	I	A	R	M	G	A	Q	V	V	E	L	G	P	V	N	A	T	I	H	K	I	N	E	C	V	N	A	A	D	L	Q	L	L	A	R	M	Y	Q	R	I	M	E	Q	L
Query Conservation
Alig confidence										.
Template Conservation										.
Template Sequence		T	D	A	S	A	F	Q	D	.	R	S	K	T	L	A	L	S	V	P	I	K	Y	L	H	S	E	V	E	T	L	H	L	N	D	L	E	K	L	V	K	L	I	E	A	L	A	F	E	L
Template Known Secondary structure			G	G	G	G	T	T	T	.	S	S											S	T	T	T	T	T													T	T	S	S	T	T	T	T	T
Template Predicted Secondary structure										.
Template SS confidence
		284	.	.	.	.	.	290	.		.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions