Return to main results Retrieve Phyre Job Id

Job DescriptionP21517
Confidence65.48%DateThu Jan 5 11:38:27 GMT 2012
Rank438Aligned Residues104
% Identity16%Templated1ur1a_
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases beta-glycanases
Resolution1.43

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   227..230.........240.........250.........260.........270.........280.........290.........300......
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Query Sequence  GALLRLRHNTQQLGMRLVLDGVFNHSGDSHAWFDRHNRGTGGACHNPESPWRDWYSFSDDGTALDWLGYASLPKLDYQSE
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Template Sequence  KDADAFVAFGTKHNLHMVGHTLVWHSQIHDEVFKNADGS. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . YISKA
Template Known Secondary structure  TT

SSSS
GGGTB
TTS
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   307..310.........320.........330.........340....... ..350.........360.........370.
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Query Sequence  SLVNEIYRGEDSIVRHWLKAPWNMDGWRLDVVHMLGEAGGA. . . . . . . . RNNMQHVAGITEAAKETQPEAYIV
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Template Sequence  ALQKKMEEHITTLAGRYKGK. . . LAAW. . DVVNEAVGDDLKMRDSHWYKIMGDDFIYNAFTLANEVDPKAHLM
Template Known Secondary structure  TTTT...
S..

B
TTSSB


TT
TTS
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   129130.........140........ .150.. .......160.........170.........180.........190......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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