Job Description P21517 Confidence 100.00% Date Thu Jan 5 11:38:27 GMT 2012 Rank 97 Aligned Residues 326 % Identity 15% Template d1ua7a2 SCOP info TIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain Resolution 2.21

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		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.												.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	V	T	A	Q	A	G	G	S	T	F	Y	G	G	D	L	D	G	I	S	E	K	L	P	Y	L	K	K	L	G	V	T	A	L	Y	L	N	P	V	F	K	A	P	S	.	.	.	.	.	.	.	.	.	.	.	V	H	K	Y	D	T	E	D	Y	R	H	V	D	P	Q	F	G	G	D	G	A	L	L	R	L
Query Conservation																																														.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																														.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	S	I	K	S	G	T	I	L	H	A	W	N	W	S	F	N	T	L	K	H	N	M	K	D	I	H	D	A	G	Y	T	A	I	Q	T	S	P	I	N	Q	V	K	E	G	N	Q	G	D	K	S	M	S	N	W	Y	W	L	Y	Q	P	T	S	Y	Q	I	G	N	R	Y	L	G	T	E	Q	E	F	K	E	M
Template Known Secondary structure				T	T	T	S						T	T	B								T							T	T		S													T	G	G	G			B	G	G	G	G	G	G	G	G										T	T	T
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	H	N	T	Q	Q	L	G	M	R	L	V	L	D	G	V	F	N	H	S	G	D	S	H	A	W	F	D	R	H	N	R	G	T	G	G	A	C	H	N	P	E	S	P	W	R	D	W	Y	S	F	S	D	D	G	T	A	L	D	W	L	G	Y	A	S	L	P	K	L	D	Y	Q	S	E	S	L	V	N	E	I
Query Conservation
Alig confidence																																																.	.	.	.	.
Template Conservation																																																.	.	.	.	.
Template Sequence		C	A	A	A	E	E	Y	G	I	K	V	I	V	D	A	V	I	N	H	T	T	F	D	Y	A	A	I	S	N	E	V	K	S	I	P	N	W	T	H	G	N	T	Q	I	K	N	.	.	.	.	.	W	S	D	R	W	D	V	T	Q	N	S	L	L	G	L	Y	D	W	N	T	Q	N	T	Q	V	Q	S	Y	L
Template Known Secondary structure							T	T	T										S	B			S		T	T	T	S						T	S	T	T							B				.	.	.	.	.	T	T								S	B	B	T	T	B					T	T	S
Template Predicted Secondary structure																																																.	.	.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.						130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	R	G	E	D	S	I	V	R	H	W	L	K	A	P	W	N	M	D	G	W	R	L	D	V	V	H	M	L	G	E	A	G	G	A	R	N	N	M	Q	H	V	A	G	I	T	E	A	A	K	E	T	Q	P	E	A	Y	I	V	G	E	H	F	G	D	A	R	Q	W	L	Q	A	D	V	E	D	A	A	M	N
Query Conservation
Alig confidence					.	.	.	.						.	.																																.	.	.	.	.
Template Conservation					.	.	.	.						.	.																																.	.	.	.	.
Template Sequence		K	R	F	.	.	.	.	L	E	R	A	L	.	.	N	D	G	A	D	G	F	R	F	D	A	A	K	H	I	E	L	P	D	D	G	S	Y	G	S	Q	F	W	P	N	I	.	.	.	.	.	T	N	T	S	A	E	F	Q	Y	G	E	I	L	Q	D	S	A	S	R	D	A	A	Y	A	N	Y	M	D	V	T
Template Known Secondary structure					.	.	.	.						.	.		T	T							T	T	G	G	G	S			T	T	S	G	G	G			S						.	.	.	.	.	T		S	S		S									S	T	T								T	T	S
Template Predicted Secondary structure					.	.	.	.						.	.																																.	.	.	.	.
Template SS confidence
		159	160	.					.	.	.	.	.			.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.						.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
		393	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.			.	.	460	.	.	.	.	.	.	.	.	.	470
Predicted Secondary structure																																																																			.	.
Query SS confidence																																																																			.	.
Query Sequence		Y	R	G	F	T	F	P	L	W	G	F	L	A	N	T	D	I	S	Y	D	P	Q	Q	I	D	A	Q	T	C	M	A	W	M	D	N	Y	R	A	G	L	S	H	Q	Q	Q	L	R	M	F	N	Q	L	D	S	H	D	T	A	R	F	K	T	L	L	G	.	.	R	D	I	A	R	L	P	L	A	V	V	W	L
Query Conservation																																																																			.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	S	N	Y	G	H	S	I	R	S	A	L	K	N	R	N	L	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	S	N	I	S	H	Y	A	S	D	V	S	A	D	K	L	V	T	W	V	E	S	H	D	T	Y	A	N	D	D	E	E	S	T	W	M	S	D	D	D	I	R	L	G	W	A	V	I
Template Known Secondary structure																T				.	.	.	.	.	.	.	.	.	.	.	.	.	.					S	S		S	S	S	S		G	G	G					S	S							S	T	T		S	S	T	T
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.															.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
		471	.		.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.		.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.
Predicted Secondary structure				.																										.
Query SS confidence				.																										.
Query Sequence		F	T	.	W	P	G	V	P	C	I	Y	Y	G	D	E	V	G	L	D	G	K	N	D	P	F	C	R	K	.	P	F	P	W	Q	V	E	K	Q	D	T	A	L	F	A	L	Y	Q	R	M	I	A	L	R	K	K
Query Conservation				.																										.
Alig confidence				.																										.													.	.	.	.
Template Conservation																																											.	.	.	.
Template Sequence		A	S	R	S	G	S	T	P	L	F	F	S	R	P	E	G	G	G	N	G	V	R	F	P	G	K	S	Q	I	G	D	R	G	S	A	L	F	E	D	Q	A	.	.	.	.	I	T	A	V	N	R	F	H	N	V
Template Known Secondary structure			T	S	S	S	S									T	T		B	T	T	B	S			S	S		B	T	B	S				G	G	G	G				.	.	.	.
Template Predicted Secondary structure																																											.	.	.	.
Template SS confidence
		294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.					.	.	.	.	.	340	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions