Return to main results Retrieve Phyre Job Id

Job DescriptionP21517
Confidence97.56%DateThu Jan 5 11:38:27 GMT 2012
Rank153Aligned Residues159
% Identity10%Templated1rh9a1
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases beta-glycanases
Resolution1.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   178.180.........190.........200.........210.........220..... ....230.........240....... ..250.
Predicted Secondary structure 






























.....


.


Query SS confidence 















































. . . . .





















.



Query Sequence  DLDGISEKLPYLKKLGVTALYLNPVFKAPSVHKYDTEDYRHVDPQFGG. . . . . DGALLRLRHNTQQLGMRLVLDG. VFNH
Query Conservation 

 

  





 


  
 
 

       

   

  

   

.....  


 

   
  

 



 .
 

Alig confidence 





















.........
















.....





















.



Template Conservation                 
 
 

 .........               
          
     
   

 
   
     
Template Sequence  TRIKVTNTFQQASKYKMNVART. . . . . . . . . WAFSHGGSRPLQSAPGVYNEQMFQGLDFVISEAKKYGIHLIMSLVNNWD
Template Known Secondary structure  TTTT

.........SS
SSSSS
STT
TT


BSSS
Template Predicted Secondary structure 




.........






























Template SS confidence 















































































   66...70.........80....... ..90.........100.........110.........120.........130......
 
   252.......260.........270.........280.........290.........300.........310.........320... .
Predicted Secondary structure 













































.......
Query SS confidence 







































































. . . . . . .
Query Sequence  SGDSHAWFDRHNRGTGGACHNPESPWRDWYSFSDDGTALDWLGYASLPKLDYQSESLVNEIYRGEDSIVRHW. . . . . . . L
Query Conservation         
                                      




     

  
          
.......
Alig confidence 





















..........................























.......
Template Conservation                        ..........................                                
Template Sequence  AFGGKKQYVEWAVQRGQKLTSD. . . . . . . . . . . . . . . . . . . . . . . . . . DDFFTNPMVKGFYKNNVKVVLTRVNTITKVAY
Template Known Secondary structure  SSSBTT




G..........................GGGGT

B
TTT
SBG
Template Predicted Secondary structure 





















..........................





Template SS confidence 















































































   137..140.........150........ .160.........170.........180.........190
 
   325....330.........340.........350.........360.........370.
Predicted Secondary structure 


















Query SS confidence 














































Query Sequence  KAPWNMDGWRLDVVHMLGEAGGARNNMQHVAGITEAAKETQPEAYIV
Query Conservation   
  





 
                             
   

Alig confidence 














































Template Conservation       
    
 

                      
   

   
 
Template Sequence  KDDPTILSWELINEPRCPSDLSGKTFQNWVLEMAGYLKSIDSNHLLE
Template Known Secondary structure  GG
TTS
BS


TT
TTS

SS
Template Predicted Secondary structure 




















Template SS confidence 














































   191........200.........210.........220.........230.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions