Job Description P21517 Confidence 100.00% Date Thu Jan 5 11:38:27 GMT 2012 Rank 27 Aligned Residues 418 % Identity 36% Template d1ji1a3 SCOP info TIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain Resolution 1.60

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		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.		.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure																																										.
Query SS confidence																																										.
Query Sequence		P	D	I	G	P	Q	W	A	A	D	Q	I	F	Y	Q	I	F	P	D	R	F	A	R	S	L	P	R	E	A	E	Q	D	H	V	Y	Y	H	H	A	A	.	G	Q	E	I	I	L	R	D	W	D	E	P	V	T	A	Q	A	G	G	S	T	F	Y	G	G	D	L	D	G	I	S	E	K	L	P	Y	L	K	K
Query Conservation																																										.
Alig confidence																																										.
Template Conservation
Template Sequence		N	F	K	T	P	D	W	L	K	N	G	V	M	Y	Q	I	F	P	D	R	F	Y	N	G	D	S	S	N	D	V	Q	T	G	S	Y	T	Y	N	G	T	P	T	E	K	K	A	W	G	S	S	V	Y	A	D	P	G	Y	D	N	S	L	V	F	F	G	G	D	L	A	G	I	D	Q	K	L	G	Y	I	K	K
Template Known Secondary structure																			G	G	G	T			S		G	G	G				T	T	S				T	T								T	T	S			S			T	T	S		G	G	G													T						T
Template Predicted Secondary structure
Template SS confidence
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
			192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.					240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure		.																																																	.	.	.	.
Query SS confidence		.																																																	.	.	.	.
Query Sequence		.	L	G	V	T	A	L	Y	L	N	P	V	F	K	A	P	S	V	H	K	Y	D	T	E	D	Y	R	H	V	D	P	Q	F	G	G	D	G	A	L	L	R	L	R	H	N	T	Q	Q	L	.	.	.	.	G	M	R	L	V	L	D	G	V	F	N	H	S	G	D	S	H	A	W	F	D	R	H	N	R	G	T
Query Conservation		.																																																	.	.	.	.
Alig confidence		.																																																	.	.	.	.
Template Conservation
Template Sequence		T	L	G	A	N	I	L	Y	L	N	P	I	F	K	A	P	T	N	H	K	Y	D	T	Q	D	Y	M	A	V	D	P	A	F	G	D	N	S	T	L	Q	T	L	I	N	D	I	H	S	T	A	N	G	P	K	G	Y	L	I	L	D	G	V	F	N	H	T	G	D	S	H	P	W	F	D	K	Y	N	N	F	S
Template Known Secondary structure		T	T								S						S	S	S	S			S		S							T	T	T																S	S	S	S	S											S	B			T	T	S	T	T	T		T	T			S	S
Template Predicted Secondary structure
Template SS confidence
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
		267	.	.	270	.	.	.	.	.	.	.			.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.			.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
Predicted Secondary structure													.	.																													.	.
Query SS confidence													.	.																													.	.
Query Sequence		G	G	A	C	H	N	P	E	S	P	W	.	.	R	D	W	Y	S	F	S	D	D	G	T	A	L	D	W	L	G	Y	A	S	L	P	K	L	D	Y	Q	S	.	.	E	S	L	V	N	E	I	Y	R	G	E	D	S	I	V	R	H	W	L	K	A	P	W	N	M	D	G	W	R	L	D	V	V	H	M	L	G
Query Conservation													.	.																													.	.
Alig confidence													.	.																													.	.
Template Conservation
Template Sequence		S	Q	G	A	Y	E	S	Q	S	S	P	W	Y	N	Y	Y	T	F	Y	T	W	P	D	S	Y	A	S	F	L	G	F	N	S	L	P	K	L	N	Y	G	N	S	G	S	A	V	R	G	V	I	Y	N	N	S	N	S	V	A	K	T	Y	L	N	P	P	Y	S	V	D	G	W	R	L	D	A	A	Q	Y	V	D
Template Known Secondary structure		S			T	T	T		T	T		T	T	G	G	G	B					T	T	T						T	T						B	B	B			S	T	T								T	T	S	T	T	S							S	T	T	T								T	T	G	G	G		B
Template Predicted Secondary structure
Template SS confidence
		283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.
		343	.	.	.	.	.	.	350	.	.				.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.		.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.																																.
Query SS confidence												.	.	.																																.
Query Sequence		E	A	G	G	A	R	N	N	M	Q	.	.	.	H	V	A	G	I	T	E	A	A	K	E	T	Q	P	E	A	Y	I	V	G	E	H	F	G	D	A	R	Q	W	L	Q	.	A	D	V	E	D	A	A	M	N	Y	R	G	F	T	F	P	L	W	G	F	L	A	N	T	D	I	S	Y	D	P	Q	Q	I	D	A
Query Conservation												.	.	.																																.
Alig confidence												.	.	.																																.
Template Conservation
Template Sequence		A	N	G	N	N	G	S	D	V	T	N	H	Q	I	W	S	E	F	R	N	A	V	K	G	V	N	S	N	A	A	I	I	G	E	Y	W	G	N	A	N	P	W	T	A	Q	G	N	Q	W	D	A	A	T	N	F	D	G	F	T	Q	P	V	S	E	W	I	T	G	K	D	Y	Q	N	N	S	A	S	I	S	T
Template Known Secondary structure		S	T	T				S	S																			T	T								S	S			G	G	G	T	T	T	S	S	S		S			B		T	T	T	T									T	S	B		T	T	S		B
Template Predicted Secondary structure
Template SS confidence
		363	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.
		419	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	T	C	M	A	W	M	D	N	Y	R	A	G	L	S	H	Q	Q	Q	L	R	M	F	N	Q	L	D	S	H	D	T	A	R	F	K	T	L	L	G	R	D	I	A	R	L	P	L	A	V	V	W	L	F	T	W	P	G	V	P	C	I	Y	Y	G	D	E	V	G	L	D	G	K	N	D	P	F	C	R	K	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	Q	F	D	S	W	L	R	G	T	R	A	N	Y	P	T	N	V	Q	Q	S	M	M	N	F	L	S	N	H	D	I	T	R	F	A	T	R	S	G	G	D	L	W	K	T	Y	L	A	L	I	F	Q	M	T	Y	V	G	T	P	T	I	Y	Y	G	D	E	Y	G	M	Q	G	G	A	D	P	D	N	R	R	S
Template Known Secondary structure													T	T	S						T	T					S			T	T	S							T	T	T													T	T	S	S	S						T	T	G	G	G	T					S	T	T	G	G	G
Template Predicted Secondary structure
Template SS confidence
		443	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.
		499	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530
Predicted Secondary structure
Query SS confidence
Query Sequence		F	P	W	Q	V	E	K	Q	D	T	A	L	F	A	L	Y	Q	R	M	I	A	L	R	K	K	S	Q	A	L	R	H	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	D	W	S	Q	A	T	P	S	N	S	A	V	A	L	T	Q	K	L	I	T	I	R	N	Q	Y	P	A	L	R	T	G
Template Known Secondary structure				T	T	S	S	S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		523	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.