Job Description P21517 Confidence 100.00% Date Thu Jan 5 11:38:27 GMT 2012 Rank 100 Aligned Residues 321 % Identity 14% Template d1jaea2 SCOP info TIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain Resolution 1.65

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		178	.	180	.	.	.	.	.	.		.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210							.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure											.																									.	.	.	.	.	.
Query SS confidence											.																									.	.	.	.	.	.
Query Sequence		D	L	D	G	I	S	E	K	L	.	P	Y	L	K	K	L	G	V	T	A	L	Y	L	N	P	V	F	K	A	P	S	V	H	K	.	.	.	.	.	.	Y	D	T	E	D	Y	R	H	V	D	P	Q	F	G	G	D	G	A	L	L	R	L	R	H	N	T	Q	Q	L	G	M	R	L	V	L	D	G	V	F	N
Query Conservation											.																									.	.	.	.	.	.
Alig confidence											.																									.	.	.	.	.	.						.
Template Conservation																																															.
Template Sequence		K	W	N	D	I	A	D	E	C	E	R	F	L	Q	P	Q	G	F	G	G	V	Q	I	S	P	P	N	E	Y	L	V	A	D	G	R	P	W	W	E	R	Y	Q	P	V	S	.	Y	I	I	N	T	R	S	G	D	E	S	A	F	T	D	M	T	R	R	C	N	D	A	G	V	R	I	Y	V	D	A	V	I	N
Template Known Secondary structure													T	T	T	T	T	T										S		B	B			T	T			G	G	G	G	G	S	B			.	S		S			T	T																T	T										S
Template Predicted Secondary structure																																															.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.		.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.								.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
Predicted Secondary structure																																											.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.
Query Sequence		H	S	G	D	S	H	A	W	F	D	R	H	N	R	G	T	G	G	A	C	H	N	P	E	S	P	W	R	D	W	Y	S	F	S	D	D	G	T	A	L	D	.	.	.	.	.	.	.	W	L	G	Y	A	S	L	P	K	L	D	Y	Q	S	E	S	L	V	N	E	I	Y	R	G	E	D	S	I	V	R	H	W
Query Conservation																																											.	.	.	.	.	.	.
Alig confidence																																											.	.	.	.	.	.	.																									.	.	.	.
Template Conservation																																																																										.	.	.	.
Template Sequence		H	M	T	G	M	N	G	V	G	T	S	G	S	S	A	D	H	D	G	M	N	Y	P	A	V	P	Y	G	S	G	D	F	H	S	P	C	E	V	N	N	Y	Q	D	A	D	N	V	R	N	C	E	L	V	G	L	R	D	L	N	Q	G	S	D	Y	V	R	G	V	L	I	D	Y	.	.	.	.	M	N	H	M
Template Known Secondary structure		B			S	S				B	T	T	S				B	T	T	T	T	B	B	T	T	T	T	B		G	G	G	B					B				T	T								S	B	B	T	T	B		B	B		T	T	S											.	.	.	.
Template Predicted Secondary structure																																																																										.	.	.	.
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170					.	.	.	.
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.									.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.
Predicted Secondary structure																																													.	.	.	.	.	.	.	.
Query SS confidence																																													.	.	.	.	.	.	.	.
Query Sequence		L	K	A	P	W	N	M	D	G	W	R	L	D	V	V	H	M	L	G	E	A	G	G	A	R	N	N	M	Q	H	V	A	G	I	T	E	A	A	K	E	T	Q	P	.	.	.	.	.	.	.	.	E	A	Y	I	V	G	E	H	F	G	D	A	R	Q	W	L	Q	A	D	V	E	D	A	A	M	N	Y	R	G
Query Conservation																																													.	.	.	.	.	.	.	.
Alig confidence			.	.																	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.																												.	.
Template Conservation			.	.																	.	.	.	.	.	.	.	.																																																				.	.
Template Sequence		I	.	.	D	L	G	V	A	G	F	R	V	D	A	A	K	H	M	S	.	.	.	.	.	.	.	.	P	G	D	L	S	V	I	F	S	G	L	K	N	L	N	T	D	Y	G	F	A	D	G	A	R	P	F	I	Y	Q	E	V	I	D	L	G	G	E	A	I	S	K	N	E	Y	T	G	F	G	C	V	.	.
Template Known Secondary structure			.	.		T	T							T	T	G	G	G	S		.	.	.	.	.	.	.	.										T						G	G	G	T			T	T													S	S	S	S			G	G	G	T	T	T	S	S			.	.
Template Predicted Secondary structure			.	.																	.	.	.	.	.	.	.	.																																																				.	.
Template SS confidence
		175			.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.									.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		396	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.				.	.	460	.	.	.	.	.	.	.	.	.	470	.	.
Predicted Secondary structure																																																																.	.	.
Query SS confidence																																																																.	.	.
Query Sequence		F	T	F	P	L	W	G	F	L	A	N	T	D	I	S	Y	D	P	Q	Q	I	D	A	Q	T	C	M	A	W	M	D	N	Y	R	A	G	L	S	H	Q	Q	Q	L	R	M	F	N	Q	L	D	S	H	D	T	A	R	F	K	T	L	L	G	.	.	.	R	D	I	A	R	L	P	L	A	V	V	W	L	F	T
Query Conservation																																																																.	.	.
Alig confidence																							.	.	.	.	.	.	.	.																																		.	.	.
Template Conservation																							.	.	.	.	.	.	.	.
Template Sequence		L	E	F	Q	F	G	V	S	L	G	N	A	F	Q	G	G	N	Q	L	K	N	.	.	.	.	.	.	.	.	L	A	N	W	G	P	E	W	G	L	L	E	G	L	D	A	V	V	F	V	D	N	H	D	N	Q	R	T	G	G	S	Q	I	L	T	Y	K	N	P	K	P	Y	K	M	A	I	A	F	M	L	A
Template Known Secondary structure															T	T	T	S		G	G	G	.	.	.	.	.	.	.	.	G	G	G		S	G	G	G	T				G	G	G					S			T	T					S		T	T				T	T	S
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.									.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
		473	.		.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.											510	.	.	.	.	.	.	.	.	.	520	.	.	.
Predicted Secondary structure				.																																				.	.	.	.	.	.	.	.	.	.
Query SS confidence				.																																				.	.	.	.	.	.	.	.	.	.
Query Sequence		W	P	.	G	V	P	C	I	Y	Y	G	D	E	V	G	L	D	G	K	N	D	P	F	C	R	K	P	F	P	W	Q	V	E	K	Q	D	T	A	.	.	.	.	.	.	.	.	.	.	L	F	A	L	Y	Q	R	M	I	A	L	R	K	K
Query Conservation				.																																				.	.	.	.	.	.	.	.	.	.
Alig confidence				.																																				.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	P	Y	G	T	T	R	I	M	S	S	F	D	F	T	D	N	D	Q	G	P	P	Q	D	G	S	G	N	L	I	S	P	G	I	N	D	D	N	T	C	S	N	G	Y	V	C	E	H	R	W	R	Q	V	Y	G	M	V	G	F	R	N	A
Template Known Secondary structure		S		S	S								B			S	S	T	T					B		T	T	S		B							T	T	S				T	T	B			G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions