 |
Job Description | P21517 | Confidence | 97.34% | Date | Thu Jan 5 11:38:27 GMT 2012 |
Rank | 164 | Aligned Residues | 77 |
% Identity | 14% | Template | d1hvxa1 |
SCOP info | Glycosyl hydrolase domain
| Glycosyl hydrolase domain
| alpha-Amylases, C-terminal beta-sheet domain
|
Resolution | 2.00 |
|
 |
  |   |
527 | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . | |
|
|
|
. | . | . | . | . | . | . | 560 | . | . | . | . | . | . | . | . | . | 570 | . | . | . | . | . | . | . | . | . | 580 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
590 | . | . | . | . | . |
Predicted Secondary structure |   |
 |
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|  |  | . | . | . | . |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
Query Sequence |   |
L | R | H | G | G | C | Q | V | L | Y | A | E | D | N | V | V | V | F | V | R | V | L | N | Q | Q | R | . |
. |
. |
. |
V | L | V | A | I | N | R | G | E | A | C | E | V | V | L | P | A | S | P | F | L | N | A | V | Q | W | Q | C | K | E | G | H | G | Q | L | T | D | . |
. |
. |
. |
. |
. |
. |
G | I | L | A | L | P |
Query Conservation |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |
|   |   |   |   |   |   | . | . | . | . |   |
|
|   |   |
|   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . |
|   |
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|   |
|   |
|
|
|
|   |
|
|
|
|
|
|
|
|   |
|   |   |   |   |   |   |
|
|
|
|
|
|
|
|
|   |   |   |
|   |
|   |
|   |
|
|   |   |   |
|
|   |   |   |   |
|   |   |
|   |   |   |   |   |
|   |
|
|   |   |
|   |
|   |
|   |
|   |
Template Sequence |   |
Y | A | Y | G | T | Q | H | D | Y | L | D | H | S | D | I | I | G | W | T | R | E | G | V | T | E | K | P | G | S | G | L | A | A | L | I | T | D | G | P | G | G | S | K | W | M | Y | V | G | K | Q | H | A | G | K | V | F | Y | D | L | T | G | N | R | S | D | T | V | T | I | N | S | D | G | W | G | E | F | K | V | N |
Template Known Secondary structure |   |
|
|
| S |
|  |  |  |  |
|
| S | S | S |  |  |  |  |  |  |
|
| B | T | T | B | T | T |
|
|  |  |  |  |  |  | S | S | S |
|  |  |  |  |  |  |
|
| G | G | G | T | T |
|  |  |  |  | T | T | S | S |
|
|
|  |  |  |
|
| T | T | S |  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
394 | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . |
  |
  |   |
596 | . | . | . | 600 | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
Query Sequence |   |
A | I | S | A | T | V | W | M |
Query Conservation |   |
  |   |
|   |   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|
|
|
|
|
Template Sequence |   |
G | G | S | V | S | V | W | V |
Template Known Secondary structure |   |
T | T |
|  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
  |   |
474 | . | . | . | . | . | 480 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|