Job Description P21517 Confidence 97.89% Date Thu Jan 5 11:38:27 GMT 2012 Rank 144 Aligned Residues 186 % Identity 26% Template d1eswa_ SCOP info TIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain Resolution 1.90

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		177	.	.		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.		.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure					.																												.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence					.																												.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	D	L	.	D	G	I	S	E	K	L	P	Y	L	K	K	L	G	V	T	A	L	Y	L	N	P	V	F	K	A	P	.	S	V	H	K	Y	D	T	E	D	Y	R	H	V	D	P	Q	F	G	G	D	G	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation					.																												.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.																												.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	V	L	G	R	E	A	R	D	F	L	R	F	L	K	E	A	G	G	R	Y	W	Q	V	L	P	L	G	P	T	G	Y	G	D	S	P	Y	Q	S	F	S	A	F	A	G	N	P	Y	L	I	D	L	R	P	L	A	E	R	G	Y	V	R	L	E	D	P	G	F	P	Q	G	R	V	D	Y	G	L	L	Y	A
Template Known Secondary structure				S	S													T	T										S		B		T	T			T	T	S	B	S		S	S				G	G	G			S						T	T	S										S	S	B
Template Predicted Secondary structure
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		W	K	W	P	A	L	K	E	A	F	R	G	F	K	E	K	A	S	P	E	E	R	E	A	F	A	A	F	R	E	R	E	A	W	W	L	E	D	Y	A	L	F	M	A	L	K	G	A	H	G	G	L	P	W	N	R	W	P	L	P	L	R	K	R	E	E	K	A	L	R	E	A	K	S	A	L	A	E	E	V
Template Known Secondary structure																																																		T	T	T			G	G	G	S						T	T												T
Template Predicted Secondary structure
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
															229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.												.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	L	L	R	L	R	H	N	T	Q	Q	L	G	M	R	L	V	L	D	G	V	F	N	H	S	G	D	S	H	A	W	F	D	R	H	N	R	G	T	G	.	.	.	.	.	.	.	.	.	.	.	G	A	C	H	N	P	E	S	P	W	R	D	W	Y	S	F	S
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																						.																		.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.
Template Conservation																																				.																																								.	.	.	.	.	.
Template Sequence		A	F	H	A	F	T	Q	W	L	F	F	R	Q	W	G	A	L	K	A	E	A	E	A	L	G	I	R	I	I	G	D	M	P	I	.	F	V	A	E	D	S	A	E	V	W	A	H	P	E	W	F	H	L	D	E	E	G	R	P	T	V	V	A	G	V	P	P	D	Y	F	S	E	T	G	.	.	.	.	.	.
Template Known Secondary structure																									T	T									S	.	S			S	S	S							G	G	G	B		B		T	T	S		B	S									S	S		S	S		.	.	.	.	.	.
Template Predicted Secondary structure																																				.																																								.	.	.	.	.	.
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.		.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
		285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.											.	.	.	.	.	.	.	.	350	.	.	.	.
Predicted Secondary structure																																																											.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																											.	.	.	.	.	.	.	.	.	.
Query Sequence		D	D	G	T	A	L	D	W	L	G	Y	A	S	L	P	K	L	D	Y	Q	S	E	S	L	V	N	E	I	Y	R	G	E	D	S	I	V	R	H	W	L	K	A	P	W	N	M	D	G	W	R	L	D	V	V	H	M	L	.	.	.	.	.	.	.	.	.	.	G	E	A	G	G	A	R	N	N	M	Q	H	V
Query Conservation																																																											.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.				.	.	.	.																	.	.													.	.	.													.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.				.	.	.	.																	.	.													.	.	.
Template Sequence		.	.	.	.	.	Q	R	W	.	.	.	.	G	N	P	L	Y	R	W	D	V	L	E	R	E	G	F	S	.	.	F	W	I	R	R	L	E	K	A	L	E	L	.	.	.	F	H	L	V	R	I	D	H	F	R	G	F	E	A	Y	W	E	I	P	A	S	C	P	T	A	V	E	G	R	W	V	K	A	P	G
Template Known Secondary structure		.	.	.	.	.				.	.	.	.					B								T	T	T		.	.													.	.	.		S						T	G	G	G	G	T							T	T		S	S	S	T	T
Template Predicted Secondary structure		.	.	.	.	.				.	.	.	.																	.	.													.	.	.
Template SS confidence
							256	.	.					.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.			.	.	.	.	.	280	.	.	.	.	.	.				.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
		355	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	I	T	E	A	A	K	E	T	Q	P	E	A	Y	I	V	G	E	H	F	G	D	A	R	Q	W	L	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	K	L	F	Q	K	I	Q	E	V	F	G	E	V	P	V	L	A	E	D	L	G	V	I	T	P	E	V	E
Template Known Secondary structure													S	S								T	T
Template Predicted Secondary structure
Template SS confidence
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions