Job Description P21517 Confidence 100.00% Date Thu Jan 5 11:38:27 GMT 2012 Rank 42 Aligned Residues 374 % Identity 41% Template d1ea9c3 SCOP info TIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain Resolution 3.2

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		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	I	G	P	Q	W	A	A	D	Q	I	F	Y	Q	I	F	P	D	R	F	A	R	S	L	P	R	E	A	E	Q	D	H	V	Y	Y	H	H	A	A	G	Q	E	I	I	L	R	D	W	D	E	P	V	T	A	Q	A	G	G	S	T	F	Y	G	G	D	L	D	G	I	S	E	K	L	P	Y	L	K	K	L	G
Query Conservation
Alig confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	Q	P	P	A	W	V	K	D	A	I	F	Y	Q	I	F	P	E	R	F	A	N	G	D	T	R	N	D	P	E	G	T	L	P	W	G	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	D	P	T	P	S	C	F	F	G	G	D	L	Q	G	V	I	D	H	L	D	H	L	S	K	L	G
Template Known Secondary structure						T												S	T	T	S					S		S		S	S			S				S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S				S	S												T								T
Template Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.																	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	T	A	L	Y	L	N	P	V	F	K	A	P	S	V	H	K	Y	D	T	E	D	Y	R	H	V	D	P	Q	F	G	G	D	G	A	L	L	R	L	R	H	N	T	Q	Q	L	G	M	R	L	V	L	D	G	V	F	N	H	S	G	D	S	H	A	W	F	D	R	H	N	R	G	T	G	G	A	C	H	N	P
Query Conservation
Alig confidence																																																																									.	.	.	.	.	.
Template Conservation																																																																									.	.	.	.	.	.
Template Sequence		V	N	A	V	Y	F	T	P	L	F	K	A	T	T	N	H	K	Y	D	T	E	D	Y	F	Q	I	D	P	Q	F	G	D	K	D	T	L	K	K	L	V	D	L	C	H	E	R	G	I	R	V	L	L	D	A	V	F	N	H	S	G	R	T	F	P	P	F	V	D	V	L	K	.	.	.	.	.	.	N	G	E
Template Known Secondary structure			S								S	S		S	S	S	S	T	T	S		S		T	T				T	T	T														T	T	T	T										S	B			T	T	T								T	.	.	.	.	.	.	T	T	T
Template Predicted Secondary structure																																																																									.	.	.	.	.	.
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.							.	.	.
		274	.	.	.	.	.	280	.	.	.									.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.
Query Sequence		E	S	P	W	R	D	W	Y	S	F	.	.	.	.	.	.	.	.	S	D	D	G	T	A	L	D	W	L	G	Y	A	S	L	P	K	L	D	Y	Q	S	E	S	L	V	N	E	I	Y	R	G	E	D	S	I	V	R	H	W	L	K	A	P	W	N	M	D	G	W	R	L	D	V	V	H	M	L	G	E	A	G
Query Conservation												.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.																																	.	.	.	.								.																.	.	.
Template Conservation																																																				.	.	.	.								.																.	.	.
Template Sequence		K	S	K	Y	K	D	W	F	H	I	R	S	L	P	L	E	V	V	D	G	I	P	T	Y	D	T	F	A	F	E	P	L	M	P	K	L	N	T	E	H	P	D	V	K	E	Y	L	L	K	A	.	.	.	.	A	E	Y	W	I	R	E	.	T	G	I	D	G	W	R	L	D	V	A	N	E	V	S	.	.	.
Template Known Secondary structure		T		T	T	T	T	S	S		B		S	S	S				T	T	S			S	B		B	S	S	S		T	T	S	B	B			T	T	S											.	.	.	.								.				S					T	T		T	T	S		.	.	.
Template Predicted Secondary structure																																																				.	.	.	.								.																.	.	.
Template SS confidence
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.					310	.	.	.	.	.	.		.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
		346	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	R	N	N	M	Q	H	V	A	G	I	T	E	A	A	K	E	T	Q	P	E	A	Y	I	V	G	E	H	F	G	D	A	R	Q	W	L	Q	A	D	V	E	D	A	A	M	N	Y	R	G	F	T	F	P	L	W	G	F	L	A	N	T	D	I	S	Y	D	P	Q	Q	I	D	A	Q	T	C	M	A	W	M
Query Conservation
Alig confidence		.	.	.	.	.																																													.												.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.																																													.												.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	H	Q	F	W	R	E	F	R	R	V	V	K	Q	A	N	P	D	A	Y	I	L	G	E	V	W	H	E	S	S	I	W	L	E	G	D	Q	F	D	A	V	M	N	Y	P	.	F	T	N	A	V	L	D	F	F	I	H	.	.	.	.	.	.	.	Q	I	A	D	A	E	K	F	S	F	M	L
Template Known Secondary structure		.	.	.	.	.																T	T									S			T	T	T	T	T	T	T	S		S			B				.									T	T	S	.	.	.	.	.	.	.			S
Template Predicted Secondary structure		.	.	.	.	.																																													.												.	.	.	.	.	.	.
Template SS confidence
							332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.		.	.	.	.	380	.	.	.	.	.	.								.	.	.	390	.	.	.	.	.	.	.	.
		426	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	N	Y	R	A	G	L	S	H	Q	Q	Q	L	R	M	F	N	Q	L	D	S	H	D	T	A	R	F	K	T	L	L	G	R	D	I	A	R	L	P	L	A	V	V	W	L	F	T	W	P	G	V	P	C	I	Y	Y	G	D	E	V	G	L	D	G	K	N	D	P	F	C	R	K	P	F	P	W	Q	V	E	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	K	Q	L	A	G	Y	P	R	Q	A	S	E	V	M	F	N	L	L	D	S	H	D	T	A	R	L	L	T	Q	A	D	G	D	K	R	K	M	K	L	A	V	L	F	Q	F	T	Y	F	G	T	P	C	I	Y	Y	G	D	E	V	G	L	D	G	G	H	D	P	G	C	R	K	C	M	E	W	D	E	T	K
Template Known Secondary structure				T	T	T	T	S							T					S			T	T	S									S													T	T	S	S	S						S	S		S	S						S					T							T	T	S
Template Predicted Secondary structure
Template SS confidence
		399	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.
		506	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	D	T	A	L	F	A	L	Y	Q	R	M	I	A	L	R	K	K	S	Q	A	L	R	H	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	D	K	D	L	F	A	F	Y	Q	T	V	I	R	L	R	Q	A	H	A	A	L	R	T	G
Template Known Secondary structure																					S
Template Predicted Secondary structure
Template SS confidence
		479	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions