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Job DescriptionP21517
Confidence100.00%DateThu Jan 5 11:38:27 GMT 2012
Rank41Aligned Residues526
% Identity18%Templatec3zt5D_
PDB info PDB header:hydrolaseChain: D: PDB Molecule:putative glucanohydrolase pep1a; PDBTitle: glge isoform 1 from streptomyces coelicolor with maltose2 bound
Resolution2.09 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   11........ 20.........30.... .....40.........50.........60.........70.........80.......
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Query Sequence  PFVKQSKDQ. . LLITLWLTGEDPPQR. IMLRTEHDNEEMSVPMHKQRSQPQPGVTAWRAAIDLSSGQPRRRYSFKLLWHD
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Template Sequence  PAKAVTGESFEVSATVFREGHDAVGANVVLRDPRGRPGPWTPMRELA. . . . PGTDRWGATVTAGETG. TWSYTVEA. . . .
Template Known Secondary structure 
TT


SSS


TT

B



B
SS....TTS


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   36...40.........50.........60.........70.........80.. .......90........ .100......
 
   88.90...... ...100.........110.........120.........130.........140..
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Query Sequence  RQRWFTPQG. . . . . . . . . . . . . FSRMPPARLEQFAVDVPDIGPQWAADQIFYQIFPDRFARSLPREAE. . . . . . . . . . . .
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Template Sequence  . . . WGDPVTTWRHHARIKIPAGLDTDLVLEEGARLYERAAADVPGREDRRELLAAVDALRDESRPAASRLAAALTPQVDA
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TTS
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   107..110.........120.........130.........140.........150.........160.........170.........180...
 
   143......150........ .160.........170.........180.........190.........200........
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Query Sequence  . . . . . QDHVYYHHAAGQEIIL. . . . . . . RDWDEPVTAQAGGSTFYGGDLDGISEKLPYLKKLGVTALYLNPVFKAPSV. .
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Template Sequence  VLARHPLRDLVTSSDPLPLLVERERALYGAWYEFFPRSEGTPHTPHGTFRTAARRLPAIAAMGFDVVYLPPIHPIGTTHR
Template Known Secondary structure  S









GGGS

SS

S

GGGTT




S
B

TT
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   184.....190.........200.........210.........220.........230.........240.........250.........260...
 
   209210.........220.........230.........240.........250.........260.........
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Query Sequence  . . . . . . . . . . . . . . . . . . . HKYDTEDYRHVDPQFGGDGALLRLRHNTQQLGMRLVLDGVFNHSGDSHAWFDRHNRGTGGA
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Template Sequence  KGRNNTLSATGDDVGVPWAIGSPEGGHDSIHPALGTLDDFDHFVTEAGKLGLEIALDFALQCSP. DHPWVHKHPE. . . . .
Template Known Secondary structure 
BGGGBSS

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TTSB
BTTB
TTS

GGG

TT



T.TS
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   264.....270.........280.........290.........300.........310.........320....... ..330.......
 
   270.........280.........290........ .300.........310.........320.........330.........340...
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Query Sequence  CHNPESPWRDWYSFSDDGTALDWLGYASL. . . . . . PKLDYQSESLVNEIYRGEDSIVRHWLKAPWNMDGWRLDVVHMLGE
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Template Sequence  . . . . . . . . . . WFHHRPDGTIAHAENPPKKYQDIYPIAFDADPDGLATETVRI. . . . LRHWM. . DHGVRIFRVDNPHTKP.
Template Known Secondary structure  ..........GS


TTS



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   338.340.........350.........360.........370......... 380.... .....390.........400
 
   344.....350.........360.........370.........380. ........390.........400.........410.........420.
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Query Sequence  AGGARNNMQHVAGITEAAKETQPEAYIVGEHFGDARQW. . LQADVEDAAMNYRGFTFPLWGFLANTDISYDPQQIDAQTC
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Template Sequence  . . . . . . . VAFWERVIADINGTDPDVIFLAEAFTRPAMMATLAQIGFQQSYTYFTW. . . . . . . . . . . . . . . . . . RNTKQEL
Template Known Secondary structure  .......
TT



S
T
S
SGGG..................

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   401........410.........420.........430.........440........ .450.....
 
   422.......430.........440.........450.........460.........470.........480.........490....
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Query Sequence  MAWMDNYRAGLSHQQQLRMFNQLDSHDTARFKTLLGRDIARLPLAVVWLFTWPGVPCIYYGDEVGLDGKNDPF. . . . . . .
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Template Sequence  TEYLTELS. . GEAASYMRPNFFANTPDILHAYLQHGG. RPAFEVRAVLAATLSPTWGIYSGYELCENTPLREGSEEYLDS
Template Known Secondary structure  ..TGGGGT

S
BTTB


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STTTTTT


BSSTT

SBTT
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   456...460... ......470.........480.........490 .........500.........510.........520.........530..
 
   495....500... ......510.........520.........530. ........540 .........550......... 560....
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Query Sequence  . . . CRKPFPWQV. EKQDTALFALYQRMIALRKKSQALRHGG. CQVLYAEDN. VVVFVRVLNQQRVLVAINR. . . . GEACE
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Template Conservation 
        
         
      
  

   


  
            



 
      



 

     
   
Template Sequence  EKYQLKPRDWTRAAREGTTIAPLVTRLNTIRRENPALRQLRDLHFHPTDKEEVIAYSKRQGSNTVLVVVNLDPRHTQEAT
Template Known Secondary structure  TTSS




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GGGG
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BS
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SSS
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   533......540.........550.........560.........570.........580.........590.........600.........610..
 
   565....570.. .......580.........590........ .600..
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Query Sequence  VVLPASPF. . . . . . . . . . LNAVQWQCKEGHGQLTDGILALPAIS. . ATVW
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Template Sequence  VSLDMPQLGLDWHESVPVRDELTGETYHW. . . GRANYVRLEPGRTPAHVC
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TGGGT

TT
TTTT...S
TTT
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   613......620.........630.........640. ........650.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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