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Job DescriptionP21517
Confidence97.99%DateThu Jan 5 11:38:27 GMT 2012
Rank139Aligned Residues162
% Identity16%Templatec3pzqA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:mannan endo-1,4-beta-mannosidase. glycosyl hydrolase family PDBTitle: structure of the hyperthermostable endo-1,4-beta-d-mannanase from2 thermotoga petrophila rku-1 with maltose and glycerol
Resolution1.92 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   177..180.........190.........200..... ....210.........220.........230.........240...
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Query Sequence  GDLDGISEKLPYLKKLGVTALYLNPVFKA. . . . . . . . . . . . . PSVHKYDTEDYRHVDPQFGGDGALLRLRHNTQQLGMRL
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Template Sequence  KSNRMIDSVLESARDMGIKVLRI. WGFLDGESYCRDKNTYMHPEPGVFGVPEGISNAQN. . GFERLDYTIAKAKELGIKL
Template Known Secondary structure  S
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BSTSBSBTTB
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S
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   244.....250.........260.........270.........280.........290.........300.........310.........320...
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Query Sequence  VLDGVFNHSGDSHAWFDRHNRGTGGACHNPESPWRDWYSFSDDGTALDWLGYASLPKLDYQSESLVNEIYRGEDSIVRHW
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Template Sequence  IIVLV. . NNWDDFGGMNQYVRWFGGTHH. . . . . . . . . . . . . . . . . . . . . . . . . . . . DDFYRDERIKEEYKKYVSFLINHV
Template Known Secondary structure 

..BSSSTTSTT
SSG............................GGGGT

B
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   127..130. ........140.........150.. .......160.........170......
 
   324.....330.........340.........350.........360.........370.
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Query Sequence  . . . . . . . LKAPWNMDGWRLDVVHMLGEAGGARNNMQHVAGITEAAKETQPEAYIV
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Template Sequence  NVYTGVPYREEPTIMAWELANELRCETDKSGNTLVEWVKEMSSYIKSLDPNHLVA
Template Known Secondary structure 
TTT

BGGG
TTS
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   177..180.........190.........200.........210.........220.........230.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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