Job Description P21517 Confidence 82.92% Date Thu Jan 5 11:38:27 GMT 2012 Rank 313 Aligned Residues 124 % Identity 20% Template c3l5aA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:nadh/flavin oxidoreductase/nadh oxidase; PDBTitle: crystal structure of a probable nadh-dependent flavin oxidoreductase2 from staphylococcus aureus Resolution 1.65 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	G	A	L	L	R	L	R	H	N	T	Q	Q	L	G	M	R	L	V	L	D	G	V	F	N	H	S	G	D	S	H	A	W	F	D	R	H	N	R	G	T	G	G	A	C	H	N	P	E	S	P	W	R	D	W	Y	S	F	S	D	D	G	T	A	L	D	W	L	G	Y	A	S	L	P	K	L	D	Y	Q	S
Query Conservation
Alig confidence																								.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	P	G	L	T	N	X	A	S	T	X	K	Q	H	G	S	L	A	I	I	Q	L	.	.	A	H	A	G	R	F	S	N	Q	A	I	L	N	F	G	K	V	Y	G	P	S	P	X	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	H	S	P	I	E	H	V	V	I	A	X	S
Template Known Secondary structure														T	T	S								.	.				G	G	G									S					S	S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S	S	S	S
Template Predicted Secondary structure																								.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.			.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.																				.	130	.	.	.	.	.	.	.	.	.	140	.
		306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.														.	.	.	.	.	.								.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.
Query Sequence		E	S	L	V	N	E	I	Y	R	G	E	D	S	I	V	R	H	W	L	K	A	P	W	N	M	D	G	W	R	L	D	V	V	H	M	L	.	.	.	.	.	.	.	.	.	.	.	.	.	G	E	A	G	G	A	.	.	.	.	.	.	.	R	N	N	M	Q	H	V	A	G	I	T	E	A	A	K	E	T	Q
Query Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.
Alig confidence																							.	.														.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.
Template Conservation																							.	.
Template Sequence		H	E	K	I	N	S	I	I	Q	Q	Y	R	D	A	T	L	R	A	I	K	A	.	.	G	F	D	G	V	E	I	S	I	A	Q	R	L	L	I	Q	T	F	F	S	T	F	S	N	R	R	T	D	H	Y	G	A	D	S	L	K	N	R	A	R	L	C	L	E	V	X	R	A	V	Q	E	V	I	D	K	E	A
Template Known Secondary structure																						T	.	.	T		S								T	T	S								T	T	T					S	T	T	S	T	T
Template Predicted Secondary structure																							.	.
Template SS confidence
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.			.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
		366	.	.	.	370	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	E	A	Y	I	V	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	D	N	F	I	L	G
Template Known Secondary structure			T	T
Template Predicted Secondary structure
Template SS confidence
		220	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions