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Job DescriptionP21517
Confidence96.33%DateThu Jan 5 11:38:27 GMT 2012
Rank204Aligned Residues345
% Identity10%Templatec3icgD_
PDB info PDB header:hydrolaseChain: D: PDB Molecule:endoglucanase d; PDBTitle: crystal structure of the catalytic and carbohydrate binding domain of2 endoglucanase d from clostridium cellulovorans
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   184.....190.........200.........210.........220.........230.........240.........250.........260...
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Query Sequence  EKLPYLKKLGVTALYLNPVFKAPSVHKYDTEDYRHVDPQFGGDGALLRLRHNTQQLGMRLVLDGVFNHSGDSHAWFDRHN
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Template Sequence  AMINKIKEAGFNTLRLP. . . . VTWDGHMGAAPEYTIDQTW. . MKRVEEIANYAFDNDMYVIINL. . . . . . . . . . . . . . . .
Template Known Secondary structure  T


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TTSB

TTT

B
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   4950.........60..... ....70.........80.... .....90.........100......
 
   264.....270.........280.........290.........300.........310.........320.........330.........340...
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Query Sequence  RGTGGACHNPESPWRDWYSFSDDGTALDWLGYASLPKLDYQSESLVNEIYRGEDSIVRHWLKAPWNMDGWRLDVVHMLGE
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . HHENEWLKPFYANEAQVKAQLTKVWTQIANNFKKY. GDHLIFETMNEPRPVG
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S
TTT


STTT
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TTS
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S
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   107..110.........120.........130.........140. ........150.......
 
   344... ..350.........360.........370.........380.........390..... ....400.....
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Query Sequence  AGGA. . . . . . . . . . . . RNNMQHVAGITEAAKETQPEAYIVGEHFGDARQWLQADVEDAAMNYRG. . . . . . FTFPLWGFLA
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Template Sequence  ASLQWTGGSYENREVVNRYNLTAVNAIRATGGNNATRYIMVPTLAASAMSTTINDLVIPNNDSKVIVSLHMYSPYFFAMD
Template Known Secondary structure  GGGTTS


T
GGGGTS

GGG

S


GGG
TT


ST
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   158.160.........170.........180.........190.........200.........210.........220.........230.......
 
   406...410.........420.........430.........440.........450.........460.........470.........480.....
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Query Sequence  NTDISYDPQQIDAQTCMAWMDNYRAGLSHQQQLRMFNQLDSHDTARFKTLLGRDIARLPLAVVWLFTWPGVPCIYYGDEV
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Template Sequence  INGTSSWGSDYDKSSLDSEFDAVYNKFVKNGRAVVIGEMGSINKNNTA. . . . . ARVTHAEYYAKSAKARGLTPIWWDNGY
Template Known Secondary structure  TTS
S


STGGGT





SS
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S
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   238.240.........250.........260.........270.........280..... ....290.........300.........310..
 
   486...490.........500.........510.........520.........530.........540.........550.........560.....
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Query Sequence  GLDGKNDPFCRKPFPWQVEKQDTALFALYQRMIALRKKSQALRHGGCQVLYAEDNVVVFVRVLNQQRVLVAINRGEACEV
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Template Sequence  SVAGKAETFGIFNRSNLTWDAPEV. . . . MKAFIKGIGGSSSAVEVTYAITNSWGSGASVN. . . . . . . . VTIKNNGTT. . .
Template Known Secondary structure 

TTSTT



TTTTSS....
B




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   313......320.........330...... ...340.........350.........360........ .370.......
 
   566...570.........580.........590.........600.
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Query Sequence  VLPASPFLNAVQWQCKEGHGQLTDGILALPAISATV
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Template Sequence  . . PINGWTLKWTMPINQTITNMWSASFVASGTTLSV
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S


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   410.........420.........430.........440...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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