Job Description P21517 Confidence 99.22% Date Thu Jan 5 11:38:27 GMT 2012 Rank 110 Aligned Residues 261 % Identity 18% Template c3hz3A_ PDB info PDB header:transferase Chain: A: PDB Molecule:glucansucrase; PDBTitle: lactobacillus reuteri n-terminally truncated glucansucrase2 gtf180(d1025n)-sucrose complex Resolution 2.22 Å

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		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.										.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.	.	.	.	.																																										.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.	.	.																																										.	.	.	.
Query Sequence		K	L	D	Y	Q	S	E	S	L	V	N	E	I	Y	R	G	E	D	S	I	V	R	H	W	L	K	.	.	.	.	.	.	.	.	.	A	P	W	N	M	D	G	W	R	L	D	V	V	H	M	L	G	E	A	G	G	A	R	N	N	M	Q	H	V	A	G	I	T	E	A	A	K	E	T	Q	P	.	.	.	.
Query Conservation																												.	.	.	.	.	.	.	.	.																																										.	.	.	.
Alig confidence																		.	.	.	.	.						.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.																		.	.	.	.
Template Conservation																		.	.	.	.	.																															.	.	.	.	.	.	.	.
Template Sequence		D	I	D	N	S	N	P	V	V	Q	A	E	E	L	N	W	.	.	.	.	.	L	Y	Y	L	M	N	F	G	T	I	T	G	N	N	P	E	A	N	F	D	G	I	R	V	N	A	V	D	N	V	.	.	.	.	.	.	.	.	D	V	D	L	L	S	I	A	R	D	Y	F	N	A	A	Y	N	M	E	Q	S
Template Known Secondary structure					T	T	S											.	.	.	.	.						T							S		T	T	S								T	T	G	G	G	S	.	.	.	.	.	.	.	.		T																T	T	S
Template Predicted Secondary structure																		.	.	.	.	.																															.	.	.	.	.	.	.	.
Template SS confidence
		985	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000						.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030									.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.
							367	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.		.	.	.	.	.	.	.	.	440
Predicted Secondary structure		.	.	.	.	.																																																																		.
Query SS confidence		.	.	.	.	.																																																																		.
Query Sequence		.	.	.	.	.	E	A	Y	I	V	G	E	H	F	G	D	A	R	Q	W	L	Q	A	D	V	E	D	A	A	M	N	Y	R	G	F	T	F	P	L	W	G	F	L	A	N	T	D	I	S	Y	D	P	Q	Q	I	D	A	Q	T	C	M	A	W	M	D	N	Y	R	A	G	.	L	S	H	Q	Q	Q	L	R	M
Query Conservation		.	.	.	.	.																																																																		.
Alig confidence		.	.	.	.	.																											.	.	.																																					.
Template Conservation																																	.	.	.
Template Sequence		D	A	S	A	N	K	H	I	N	I	L	E	D	W	G	W	D	D	P	A	Y	V	N	K	I	G	N	P	Q	L	T	.	.	.	M	D	D	R	L	R	N	A	I	M	D	T	L	S	G	A	P	D	K	N	Q	A	L	N	K	L	I	T	Q	S	L	V	N	R	A	N	D	N	T	E	N	A	V	I	P	S
Template Known Secondary structure						T	T	S									T	T								T	T		S	S	B		.	.	.													T	S	S		T	T	T				T	T					S	S	S	S			S					S	S		S
Template Predicted Secondary structure																																	.	.	.
Template SS confidence
		1052	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.				.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.
		441	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.																																				.	.	.	.	.	470	.	.	.	.		.	.	.	.	.	480	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Query Sequence		F	N	Q	L	D	S	H	D	T	A	R	F	K	T	L	L	G	R	D	I	A	R	L	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	A	V	V	W	L	F	T	W	P	.	G	V	P	C	I	Y	Y	G	D	E
Query Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Template Conservation
Template Sequence		Y	N	F	V	R	A	H	D	S	N	A	Q	D	Q	I	R	Q	A	I	Q	A	A	T	G	K	P	Y	G	E	F	N	L	D	D	E	K	K	G	M	E	A	Y	I	N	D	Q	N	S	T	N	K	K	W	N	L	Y	N	M	P	S	A	Y	T	I	L	L	T	N	K	D	S	V	P	R	V	Y	Y	G	D	L
Template Known Secondary structure					S			S	S	T	T	T																T	T																			T	S	S	S		S	S	S		S													S	S							G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		1129	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.
		485	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550
Predicted Secondary structure																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	G	L	D	G	K	N	D	P	F	C	R	K	P	F	P	W	Q	V	E	K	Q	D	T	A	L	F	A	L	Y	Q	R	M	I	A	L	R	K	K	S	Q	A	L	R	H	G	G	C	Q	V	L	Y	A	E	D	N	V	V	V	F	V	R	V	L	N	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.
Template Sequence		Y	Q	D	G	G	Q	.	.	.	.	.	.	.	.	.	.	.	.	Y	M	E	H	K	T	R	Y	F	D	T	I	T	N	L	L	K	T	R	V	K	.	.	.	Y	V	A	G	G	Q	T	M	S	V	D	K	N	G	I	L	T	N	V	R	F	G	K	G	A	M	N	A	T	D	T	G	T	D	E	T	R	T
Template Known Secondary structure		B		S	S	B	S	.	.	.	.	.	.	.	.	.	.	.	.	T	T		S	B		T	T														.	.	.				S								T	T	S									T	T		S	S	T	T					T	T	T	T	T
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.
Template SS confidence
		1209	1210	.	.	.	.													.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.				.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.
		551	.	.	.	.	.	.	.	.							560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.
Predicted Secondary structure											.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.
Query Sequence		Q	R	V	L	V	A	I	N	R	.	.	.	.	.	.	G	E	A	C	E	V	V	L	P	A	S	P	F	L	N	A	V	Q	W	Q	C	K	E	G	H	G	Q	L	T	D	G	I	L	A
Query Conservation											.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.																								.	.
Template Conservation																																								.	.
Template Sequence		E	G	I	G	V	V	I	S	N	N	T	N	L	K	L	N	D	G	E	S	V	V	L	H	M	G	A	A	H	K	N	Q	K	Y	R	A	V	I	.	.	L	T	T	E	D	G	V	K	N
Template Known Secondary structure												T	T		B			T	T									T	T	S	T	T								.	.				S	S	S
Template Predicted Secondary structure																																								.	.
Template SS confidence
		1274	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.			.	.	.	.	.	.	.	.	1320

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions