Job Description P21517 Confidence 81.05% Date Thu Jan 5 11:38:27 GMT 2012 Rank 326 Aligned Residues 142 % Identity 11% Template c3gzaB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:putative alpha-l-fucosidase; PDBTitle: crystal structure of putative alpha-l-fucosidase (np_812709.1) from2 bacteroides thetaiotaomicron vpi-5482 at 1.60 a resolution Resolution 1.60 Å

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		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.		.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.			.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure																			.																						.	.
Query SS confidence																			.																						.	.
Query Sequence		L	P	Y	L	K	K	L	G	V	T	A	L	Y	L	N	P	V	.	F	K	A	P	S	V	H	K	Y	D	T	E	D	Y	R	H	V	D	P	Q	F	.	.	G	G	D	G	A	L	L	R	L	R	H	N	T	Q	Q	L	G	M	R	L	V	L	D	G	V	F	N	H	S	G	D	S	H	A	W	F	D	R	H
Query Conservation																			.																						.	.
Alig confidence																			.																						.	.																							.	.	.	.	.						.	.	.	.	.	.	.
Template Conservation																																																																	.	.	.	.	.						.	.	.	.	.	.	.
Template Sequence		V	Q	A	A	K	A	A	G	C	K	F	A	V	L	T	A	T	H	E	T	G	F	G	L	W	Q	S	D	V	N	P	Y	C	L	K	A	V	K	W	R	D	G	K	G	D	I	V	R	D	F	V	N	S	C	R	K	Y	G	L	Q	P	G	I	.	.	.	.	.	Y	I	G	I	R	.	.	.	.	.	.	.
Template Known Secondary structure							T	T	T											S	S			B	S	S			S	S		S	S	B	G	G	G	S	S	G	G	G	G	T															T						.	.	.	.	.					S	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																	.	.	.	.	.						.	.	.	.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.						.	.	.	.	.
		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.		330	.	.	.	.	.	.	.	.	.	340	.
Predicted Secondary structure																																																																					.
Query SS confidence																																																																					.
Query Sequence		N	R	G	T	G	G	A	C	H	N	P	E	S	P	W	R	D	W	Y	S	F	S	D	D	G	T	A	L	D	W	L	G	Y	A	S	L	P	K	L	D	Y	Q	S	E	S	L	V	N	E	I	Y	R	G	E	D	S	I	V	R	H	W	L	K	A	P	W	N	.	M	D	G	W	R	L	D	V	V	H	M	L
Query Conservation																																																																					.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.	.				.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	N	S	L	L	G	I	H	N	F	K	A	E	G	E	G	A	F	A	R	N	R	Q	A	W	Y	K	R	L	C	E	K	X	V	T	E	L	C	T	.	.	.	.	.	R	Y	G	D	L	Y	X	I	W	F	D	G	G	A	D	D
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T	T	T			T	T				S	S	S																								.	.	.	.	.	S	S				S					T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.	.
Template SS confidence
																						150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.						.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
		342	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	E	A	G	G	A	R	N	N	M	Q	H	V	A	G	I	T	E	A	A	K	E	T	Q	P	E	A	Y	I	V	G
Query Conservation
Alig confidence						.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.	.	.
Template Sequence		P	R	A	D	.	.	.	.	.	.	.	.	G	P	D	V	E	P	I	V	N	K	Y	Q	P	N	C	L	F	Y	H
Template Known Secondary structure		T	T	T	T	.	.	.	.	.	.	.	.	S												T	T	S
Template Predicted Secondary structure						.	.	.	.	.	.	.	.
Template SS confidence
		205	.	.	.									.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions