Job Description P21517 Confidence 68.72% Date Thu Jan 5 11:38:27 GMT 2012 Rank 409 Aligned Residues 100 % Identity 18% Template c3d5hA_ PDB info PDB header:protein binding Chain: A: PDB Molecule:haementhin; PDBTitle: crystal structure of haementhin from haemanthus multiflorus2 at 2.0a resolution: formation of a novel loop on a tim3 barrel fold and its functional significance Resolution 2.00 Å

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		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	R	H	V	D	P	Q	F	G	G	D	G	A	L	L	R	L	R	H	N	T	Q	Q	L	G	M	R	L	V	L	D	G	V	F	N	H	S	G	D	S	H	A	W	F	D	R	H	N	R	G	T	G	G	A	C	H	N	P	E	S	P	W	R	D	W	Y	S	F	S	D	D	G	T	A	L	D	W	L	G	Y
Query Conservation
Alig confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	P	A	L	D	I	S	G	H	S	P	S	G	L	E	P	Q	I	K	H	C	Q	S	K	N	V	K	V	L	L	S	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	P
Template Known Secondary structure							S	T	T			T	G	G	G										T	T								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.																																														.	.	.
		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.													330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.
Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																				.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	S	L	P	K	L	D	Y	Q	S	E	S	L	V	N	E	I	Y	R	G	E	D	S	I	V	R	H	W	L	K	A	P	W	N	.	.	.	.	.	.	.	.	.	.	.	.	M	D	G	W	R	L	D	V	V	H	M	L	G	E	A	G	G	A	R	N	N	M	Q	H	V	A	G	I	T	E	A	A	K	E
Query Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.																							.	.	.	.	.				.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.
Template Conservation				.	.																							.	.	.	.	.																							.	.	.	.	.
Template Sequence		K	G	.	.	P	Y	S	L	D	S	R	S	D	A	N	D	L	A	V	Y	L	F	N	N	F	L	.	.	.	.	.	L	P	P	G	H	S	E	N	R	P	F	G	N	A	V	L	D	G	I	D	F	H	.	.	.	.	.	I	E	H	G	G	P	S	Q	Y	Q	L	L	A	N	I	L	S	S	F	R	L	A
Template Known Secondary structure		S		.	.	S	B				S																T	.	.	.	.	.	S				S	S	S			T	T	T	T				S						.	.	.	.	.			S	S		S	T	T													T	T
Template Predicted Secondary structure				.	.																							.	.	.	.	.																							.	.	.	.	.
Template SS confidence
		78	.			80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.						.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.						.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
		364	.	.	.	.	.	370	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	Q	P	E	A	Y	I	V	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	T	E	F	A	L	T	A	A
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		146	.	.	.	150	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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