Job Description P21517 Confidence 99.72% Date Thu Jan 5 11:38:27 GMT 2012 Rank 107 Aligned Residues 261 % Identity 19% Template c3aicC_ PDB info PDB header:transferase Chain: C: PDB Molecule:glucosyltransferase-si; PDBTitle: crystal structure of glucansucrase from streptococcus mutans Resolution 3.11 Å

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		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.										.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.	.	.	.	.																																									.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.	.	.																																									.	.	.	.	.
Query Sequence		K	L	D	Y	Q	S	E	S	L	V	N	E	I	Y	R	G	E	D	S	I	V	R	H	W	L	K	.	.	.	.	.	.	.	.	.	A	P	W	N	M	D	G	W	R	L	D	V	V	H	M	L	G	E	A	G	G	A	R	N	N	M	Q	H	V	A	G	I	T	E	A	A	K	E	T	Q	.	.	.	.	.
Query Conservation																												.	.	.	.	.	.	.	.	.																																									.	.	.	.	.
Alig confidence																		.	.	.	.	.						.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.																	.	.	.	.	.
Template Conservation																		.	.	.	.	.																															.	.	.	.	.	.	.	.
Template Sequence		D	V	D	N	S	N	P	V	V	Q	A	E	Q	L	N	W	.	.	.	.	.	L	H	F	L	M	N	F	G	N	I	Y	A	N	D	P	D	A	N	F	D	S	I	R	V	D	A	V	D	N	V	.	.	.	.	.	.	.	.	D	A	D	L	L	Q	I	A	G	D	Y	L	K	A	A	K	G	I	H	K	N
Template Known Secondary structure					T	T	S											.	.	.	.	.					T	T							S		G	G	G								T	T	G	G	G	S	.	.	.	.	.	.	.	.		T																T	T	T
Template Predicted Secondary structure																		.	.	.	.	.																															.	.	.	.	.	.	.	.
Template SS confidence
		437	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.						.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.									.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.
						366	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.		.	.	.	.	.	.	.	.	440
Predicted Secondary structure		.	.	.	.																																																																			.
Query SS confidence		.	.	.	.																																																																			.
Query Sequence		.	.	.	.	P	E	A	Y	I	V	G	E	H	F	G	D	A	R	Q	W	L	Q	A	D	V	E	D	A	A	M	N	Y	R	G	F	T	F	P	L	W	G	F	L	A	N	T	D	I	S	Y	D	P	Q	Q	I	D	A	Q	T	C	M	A	W	M	D	N	Y	R	A	G	.	L	S	H	Q	Q	Q	L	R	M
Query Conservation		.	.	.	.																																																																			.
Alig confidence		.	.	.	.																												.	.	.																																					.
Template Conservation																																	.	.	.
Template Sequence		D	K	A	A	N	D	H	L	S	I	L	E	A	W	S	Y	N	D	T	P	Y	L	H	D	D	G	D	N	M	I	N	.	.	.	M	D	N	R	L	R	L	S	L	L	Y	S	L	A	K	P	L	N	Q	R	S	G	M	N	P	L	I	T	N	S	L	V	N	R	T	D	D	N	A	E	T	A	A	V	P	S
Template Known Secondary structure							T	T								S	T	T								T	T		S	S	B		.	.	.	B												T	T	S		G	G	G				S	T					S	S	S	S			S					S	B		S	S
Template Predicted Secondary structure																																	.	.	.
Template SS confidence
		504	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.				.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580
		441	.	.	.	.	.	.	.	.																											450	.	.	.	.	.	.	.	.	.	460	.	.	.	.												.	.	.	.	.	470	.	.		.	.	.	.	.	.	.	480	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.									.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.									.
Query Sequence		F	N	Q	L	D	S	H	D	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	R	F	K	T	L	L	G	R	D	I	A	R	L	P	.	.	.	.	.	.	.	.	.	.	.	L	A	V	V	W	L	F	T	.	W	P	G	V	P	C	I	Y	Y	G
Query Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.									.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.									.
Template Conservation
Template Sequence		Y	S	F	I	R	A	H	D	S	E	V	Q	D	L	I	R	D	I	I	K	A	E	I	N	P	N	V	V	G	Y	S	F	T	M	E	E	I	K	K	A	F	E	I	Y	N	K	D	L	L	A	T	E	K	K	Y	T	H	Y	N	T	A	L	S	Y	A	L	L	L	T	N	K	S	S	V	P	R	V	Y	Y	G
Template Known Secondary structure					S			S	S	T	T	T												T		T	T			T	T																					S	S		S	S	S		S										T	T		S	S	S
Template Predicted Secondary structure
Template SS confidence
		581	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660
		483	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.				.	.	540	.	.	.	.	.	.	.	.	.	550
Predicted Secondary structure																																																									.	.	.														.	.	.	.	.	.	.	.	.
Query SS confidence																																																									.	.	.														.	.	.	.	.	.	.	.	.
Query Sequence		D	E	V	G	L	D	G	K	N	D	P	F	C	R	K	P	F	P	W	Q	V	E	K	Q	D	T	A	L	F	A	L	Y	Q	R	M	I	A	L	R	K	K	S	Q	A	L	R	H	G	G	C	Q	V	L	Y	A	.	.	.	E	D	N	V	V	V	F	V	R	V	L	N	Q	.	.	.	.	.	.	.	.	.
Query Conservation																																																									.	.	.														.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.												.	.	.														.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.
Template Sequence		D	M	F	T	D	D	G	Q	.	.	.	.	.	.	.	.	.	.	.	.	Y	M	A	H	K	T	I	N	Y	E	A	I	E	T	L	L	K	A	R	I	K	.	.	.	Y	V	S	G	G	Q	A	M	R	N	Q	Q	V	G	N	S	E	I	I	T	S	V	R	Y	G	K	G	A	L	K	A	T	D	T	G	D
Template Known Secondary structure				B		S	S	B	S	.	.	.	.	.	.	.	.	.	.	.	.	T	T		S	B		T	T														.	.	.				S										T	T											T	T			S	T	T
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.
Template SS confidence
		661	.	.	.	.	.	.	.													.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.				690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.
							551	.	.	.	.	.	.	.	.							560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.
Predicted Secondary structure		.	.	.	.	.										.	.	.	.	.	.
Query SS confidence		.	.	.	.	.										.	.	.	.	.	.
Query Sequence		.	.	.	.	.	Q	R	V	L	V	A	I	N	R	.	.	.	.	.	.	G	E	A	C	E	V	V	L	P	A	S	P	F	L	N	A	V	Q	W	Q	C	K	E	G	H	G	Q	L	T	D	G	I	L	A
Query Conservation		.	.	.	.	.										.	.	.	.	.	.
Alig confidence		.	.	.	.	.										.	.	.	.	.	.																								.	.
Template Conservation																																													.	.
Template Sequence		R	I	T	R	T	S	G	V	V	V	I	E	G	N	N	P	S	L	R	L	K	A	S	D	R	V	V	V	N	M	G	A	A	H	K	N	Q	A	Y	R	P	L	L	.	.	L	T	T	D	N	G	I	K	A
Template Known Secondary structure						T											T	T		B			T	T									G	G	G	T	T								.	.				S	S	S
Template Predicted Secondary structure																																													.	.
Template SS confidence
		726	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.			.	770	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions