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Job DescriptionP21517
Confidence100.00%DateThu Jan 5 11:38:27 GMT 2012
Rank44Aligned Residues440
% Identity23%Templatec2zidA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:dextran glucosidase; PDBTitle: crystal structure of dextran glucosidase e236q complex with2 isomaltotriose
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   116...120.........130.........140.........150.........160.........170.........180.........190.....
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Query Sequence  GPQWAADQIFYQIFPDRFARSLPREAEQDHVYYHHAAGQEIILRDWDEPVTAQAGGSTFYGGDLDGISEKLPYLKKLGVT
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Template Sequence  QKHWWHKATVYQIYPKSFMDTNGDGI. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . GDLKGITSKLDYLQKLGVM
Template Known Secondary structure 


GGGG


GGGT

SSSSSS...................................

TTT
S
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   2.......10.........20....... ..30.........40......
 
   196...200..... ....210.........220.........230.........240.........250.........260.........270..
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Query Sequence  ALYLNPVFKA. PSVHKYDTEDYRHVDPQFGGDGALLRLRHNTQQLGMRLVLDGVFNHSGDSHAWFDRHNRGTGGACHN. .
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Template Sequence  AIWLSPVYDSPMDDNGYDIANYEAIADIFGNMADMDNLLTQAKMRGIKIIMDLVVNHTSDEHAWFIEAREHPDSSERDYY
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TTTTSS
S
GGG

TTT


SB

TTS
TTSGGGGGB
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   47..50.........60.........70.........80.........90.........100.........110.........120......
 
   273......280.........290.........300.........310.........320.........330.........340..
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Query Sequence  . . . . . . . . . . PESPWRDWYSFSDDGTALDWLGYASLPKLDYQSESLVNEIYRGEDSIVRHWLKAPWNMDGWRLDVVHMLG
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Template Sequence  IWCDQPNDLESIFGGSAWQYDDKSDQYYLHFFSKKQPDLNWENANLRQKIYDM. . . . MNFWI. . DKGIGGFRMDVIDMIG
Template Known Secondary structure 
SS

S
B
TTSSBSTTTT
SS
TTS
BB
TT
......TTT

TTGGGTT
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   127..130.........140.........150.........160.........170......... 180.... .....190.........200
 
   343......350 .........360.........370.........380.. .......390.........400.........410...
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Query Sequence  EAGGARNN. . . . . . MQHVAGITEAAKETQPEAYIVGEHFGDARQWL. . . QADVEDAAMNYRGFTFPLWGFLANTDISYDP
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Template Conservation                             .        
                                           
Template Sequence  KIPAQHIVSNGPKLHAYLKEMNAASFG. QHDLLTVGQTWGATPEIAKQYSNPVNHELSMVFQFEHIGLQHKPEAPKWDYV
Template Known Secondary structure 
BGGGTB
SS
TTTGG.GS


TT


GGG
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S

TTGGGGB
TTS
TTSB
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   201........210.........220....... ..230.........240.........250.........260.........270.........
 
   414.....420.........430.........440.........450........ .460.........470.........480.........
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Query Sequence  QQIDAQTCMAWMDNYRAGLSHQQQLRMFNQLDSHDTARFKTLLGR. . . . DIARLPLAVVWLFTWPGVPCIYYGDEVGLDG
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Template Sequence  KELNVPALKTIFNKWQTELELGQG. WNSLFWNNHDLPRVLSIWGNTGKYREKSAKALAILLHLMRGTPYIYQGEEIGMTN
Template Known Secondary structure 
S

S
TTT
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S

TTS

S
SSTTTSSSTTGGGT


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   280.........290.........300... ......310.........320.........330.........340.........350........
 
   490..... ....500.. ..
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Query Sequence  KNDPFC. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . RKPFPWQ. . . . . . . . . . . . . . . . . . . . . . . . . . . . VE
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Template Conservation                                             
  
 
       
                       
Template Sequence  YPFKDLNELDDIESLNYAKEAFTNGKSMETIMDSIRMIGRDNARTPMQWDASQNAGFSTADKTWLPVNPNYKDINVQAAL
Template Known Secondary structure 



SGGG


TTT


GGGG
S




SSGGGGS

SSS
SS


GGGGTS
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   359360.........370.........380.........390.........400.........410.........420.........430........
 
   505....510.........520.........530.........540.........550.........560.... .....570.........580...
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Query Sequence  KQDTALFALYQRMIALRKKSQALRHGGCQVLYAEDNVVVFVRVLNQQRVLVAINRGEACE. VVLPASPFLNAVQWQCKEG
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Template Sequence  KNSNSIFYTYQQLIQLRKENDWLVDADFELLPTADKVFAYLRKVREERYLIVVNVSDQEEVLEIDVDKQETL. . . . ISNT
Template Known Secondary structure  STTS
T




TTTT
SSS






....SS
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   439440.........450.........460.........470.........480.........490.........500.........510 ....
 
   584.....590.........600..
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Query Sequence  HGQLTDGILALPAISATVW
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Template Sequence  NESAALANHKLQPWDAFCI
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   515....520.........530...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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