Job Description P21517 Confidence 99.37% Date Thu Jan 5 11:38:27 GMT 2012 Rank 108 Aligned Residues 337 % Identity 14% Template c2yfnA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:alpha-galactosidase-sucrose kinase agask; PDBTitle: galactosidase domain of alpha-galactosidase-sucrose kinase,2 agask Resolution 1.45 Å

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		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.		.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure																										.
Query SS confidence																										.
Query Sequence		D	L	D	G	I	S	E	K	L	P	Y	L	K	K	L	G	V	T	A	L	Y	L	N	P	.	V	F	K	A	P	S	V	H	K	Y	D	T	E	D	Y	R	H	V	D	P	Q	F	G	G	D	G	A	L	L	R	L	R	H	N	T	Q	Q	L	G	M	R	L	V	L	D	G	V	F	N	H	S	G	D	S	H
Query Conservation																										.
Alig confidence																										.																									.	.
Template Conservation																																																			.	.
Template Sequence		T	G	D	T	I	V	D	L	A	K	E	A	A	S	L	G	I	D	M	V	V	M	D	D	G	W	F	G	K	R	N	D	D	N	S	S	L	G	D	W	Q	V	N	E	T	K	L	G	G	.	.	S	L	A	E	L	I	T	R	V	H	E	Q	G	M	K	F	G	I	W	I	E	P	E	M	I	N	E	D	S
Template Known Secondary structure															T	T	T								S	S	S	B	T	T		S	S	T	T	S		T	T			S	B						T	S	.	.												T	T									T	T				S	S	S
Template Predicted Secondary structure																																																			.	.
Template SS confidence
		344	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.			.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	W	F	D	R	H	N	R	G	T	G	G	A	C	H	N	P	E	S	P	W	R	D	W	Y	S	F	S	D	D	G	T	A	L	D	W	L	G	Y	A	S	L	P	K	L	D	Y	Q	S	E	S	L	V	N	E	I	Y	R	G	E	D	S	I	V	R	H	W	L	K	A	P	W	N	M	D	G	W	R	L	D
Query Conservation
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.
Template Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.
Template Sequence		D	L	Y	R	A	H	P	D	W	A	I	R	I	Q	G	K	K	P	V	R	S	R	N	Q	L	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	D	F	S	R	K	E	V	R	D	C	V	F	D	Q	I	C	V	V	L	.	.	.	.	.	D	Q	G	K	I	D	Y	V	K	W	D
Template Known Secondary structure								G	G	G	B				T	T	S					B	T	T	B			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	B		T	T																	.	.	.	.	.	T	T	S
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.
Template SS confidence
		422	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.																			.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.						.	.	470	.	.	.	.	.	.	.	.
		337	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.				.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.
Predicted Secondary structure																							.	.	.
Query SS confidence																							.	.	.
Query Sequence		V	V	H	M	L	G	E	A	G	G	A	R	N	N	M	Q	H	V	A	G	I	.	.	.	T	E	A	A	K	E	T	Q	P	E	A	Y	I	V	G	E	H	F	G	D	A	R	Q	W	L	Q	A	D	V	E	D	A	A	M	N	Y	R	G	F	T	F	P	L	W	G	F	L	A	N	T	D	I	S	Y	D	P
Query Conservation																							.	.	.
Alig confidence																							.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	N	R	S	M	A	D	V	Y	A	G	N	L	S	Y	D	Y	V	L	G	V	Y	D	F	M	E	R	L	C	S	R	Y	P	D	L	L	L	E	G	C	S	G	G	G	G	R	F	D	A	G	M	L	Y	Y	S	P	Q	I	W	C	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				S				S			S	T	T																					T	T							B	T	B	B	T	T		S					T	T		S					B	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		479	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.
		414	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Q	I	D	A	Q	T	C	M	A	W	M	D	N	Y	R	A	G	L	S	H	Q	Q	Q	L	R	M	F	N	Q	L	D	S	H	D	T	A	R	F	K	T	L	L	G	R	D	I	A	R	L	P	L	A	V	V	W	L	F	T	W	P	G	V	P	C	I	Y	Y	G	D	E	V	G	L	D	G	K	N	D	P
Query Conservation
Alig confidence																																											.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																											.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	N	T	D	A	I	N	R	T	R	I	Q	Y	G	T	S	F	F	Y	P	V	S	A	M	G	A	H	V	S	A	V	P	N	H	Q	T	G	R	V	T	S	.	.	.	.	.	.	.	.	.	.	F	H	T	R	G	V	T	A	M	A	G	T	F	G	Y	E	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S															T	T	T	S		G	G	G								S	S		T	T	T						.	.	.	.	.	.	.	.	.	.									T	T	T	T					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580											.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.
		494	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.		.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540					.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.				.
Predicted Secondary structure																																	.																	.	.	.	.																									.	.	.
Query SS confidence																																	.																	.	.	.	.																									.	.	.
Query Sequence		F	C	R	K	P	F	P	W	Q	V	E	K	Q	D	T	A	L	F	A	L	Y	Q	R	M	I	A	L	R	K	K	S	.	Q	A	L	R	H	G	G	C	Q	V	L	Y	A	E	D	N	.	.	.	.	V	V	V	F	V	R	V	L	N	Q	Q	R	V	L	V	A	I	N	R	G	E	A	C	E	.	.	.	V
Query Conservation																																	.																	.	.	.	.																									.	.	.
Alig confidence		.	.	.	.	.	.	.																									.																	.	.	.	.																									.	.	.
Template Conservation		.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	L	N	P	A	L	L	S	D	E	E	K	Q	Q	I	R	E	Q	I	K	T	Y	K	K	Y	E	T	L	I	N	E	G	T	Y	W	R	L	S	D	P	F	T	D	E	I	A	A	W	M	S	V	S	E	E	Q	D	H	A	L	V	S	V	V	R	L	M	A	E	A	N	Q	A	T	V
Template Known Secondary structure		.	.	.	.	.	.	.	S		G	G	G	S																									S						S		T	T	T	S	S									T	T	S	S													S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.
Template SS confidence
									597	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.
		566	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	P	A	S	P	F	L	N	A	V	Q	W	Q	C	K	E	G	H	G	Q	L	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	V	R	L	R	G	L	K	P	D	A	V	Y	L	E	E	Q	S	G	R	Q	Y	S
Template Known Secondary structure							S	S		T	T						T	T	T
Template Predicted Secondary structure
Template SS confidence
		670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions