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Job DescriptionP21517
Confidence100.00%DateThu Jan 5 11:38:27 GMT 2012
Rank8Aligned Residues541
% Identity20%Templatec2wanA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:pullulanase; PDBTitle: pullulanase from bacillus acidopullulyticus
Resolution1.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30.........40.........50.........60.........70.........80....
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Query Sequence  WHLPVPPFVKQSKDQLLITLWLTGEDPPQRIMLRTEHDNEEMSVPMHKQRSQPQPGVTAWRAAIDLSSGQPRRRYSFKLL
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Template Sequence  DYSGNDLGNVYSKDATSFRVWAPTASNVQLLLYNSEKGSITKQLEMQK. . . . . . SDNGTW. . KLQVSGNLENWYYLYQVT
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S


SS
TT
SSSSSS

S
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GGG..S

TT
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   312.......320.........330.........340.........350......... 360..... ....370.........380...
 
   85....90.........100.........110 .........120.........130.........140.........150...
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Query Sequence  . WHDRQRWFTPQGFSRMPPARLEQFAV. . . . . . . . . . DVPDIGPQWAADQIFYQIFPDRFARSLPREAEQDHVYYHHAAG
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Template Sequence  VNGTTQTAVDPYARAISVNATRGMIVDLKATDPAGWQGDHEQTPANPVDEVIYEAHVRDFSIDANSGMKNKGKY. . . . . .
Template Known Secondary structure 
SS


TT
SSBSGGGSS


GGGGS
TTGGG





SSGGG



STTS

SSTTSG......
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   384.....390.........400.........410.........420.........430.........440.........450.......
 
   154.....160.........170.........180.........190.........200....... ..210.........220....
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Query Sequence  QEIILRDWDEPVTAQAGGSTFYGGDLDGISEKLPYLKKLGVTALYLNPVFKAPS. . . . . . . . . VHKYDTEDYRHVDPQFG
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Template Sequence  . . . . . . . . . . . . . . . LAFTEHGTKGPDHVKTGIDSLKELGITTVQLQPVEEFNSIDETQPDTYNWGYDPRNYNVPEGAYA
Template Known Secondary structure  ...............GGGG

S
B
GGG
B
T

S

SSS
TTSTTS




S
GGGS
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   458.460.........470.........480.........490.........500.........510.........520..
 
   225 ....230.........240.........250.........260.........270.........280.........290.......
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Query Sequence  G. . . . . . . DGALLRLRHNTQQLGMRLVLDGVFNHSGDSHAWFDRHNRGTGGACHNPESPWRDWYSFSDDGTALDWLGYAS
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Template Sequence  TTPEGTARITELKQLIQSLHQQRIGVNMDVVYNHTFDVMVSDFDKIVPQY. . . . . . . . . . . . YYRTDSNGNYTNGSG. . .
Template Known Secondary structure  S
SSTTTT

TT

S
SSSSSTTT............TB
B
TTS
B

TT
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   523......530.........540.........550.........560.........570.. .......580.......
 
   298.300.........310.........320.........330.........340.........350.........360.........370.......
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Query Sequence  LPKLDYQSESLVNEIYRGEDSIVRHWLKAPWNMDGWRLDVVHMLGEAGGARNNMQHVAGITEAAKETQPEAYIVGEHFGD
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Template Sequence  GNEFATEHPMAQKFVLDS. . . . VNYWVNE. YHVDGFRFDLMALLG. . . . . . . . KDTMAKISNELHAINPGIVLYGEPWTG
Template Known Secondary structure 


B
TTS.....


TTGGGG
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TT

SS
S
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   589590.........600...... ...610... ......620........ .630.........640.........650.....
 
   378.380........ .390.........400.........410... ......420.........430.........440......
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Query Sequence  ARQWLQADVED. . . . . AAMNYRGFTFPLWGFLANTDISYDP. . . . . . QQIDAQTCMAWMDNYRAGLSHQQQLRMFNQLDS
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Template Sequence  GTSGLSSDQLVTKGQQKGLGIGVFNDNIRNGLDGNVFDKTAQGFATGDPNQVDVIKNGVIGSIQDFTS. APSETINYVTS
Template Known Secondary structure  S

SS
TTTS

TTTTTTTT



TT
TT


TTTT
SS
BTTTTTT
S.SGGG
S

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   656...660.........670.........680.........690.........700.........710.........720... ......730....
 
   447..450......... 460.........470.........480.........490...... ...500.........510.
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Query Sequence  HDTARFKTLLGRD. . . . . . . . . IARLPLAVVWLFTWPGVPCIYYGDEVGLDGKNDPFCR. . . . . . KPFPWQVEKQDTALF
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Template Sequence  HDNMTLWDKILASNPSDTEADRIKMDELAHAVVFTSQGVPFMQGGEEMLRTKGGNDNSYNAGDSVNQFDWSRKAQFKDVF
Template Known Secondary structure  SSS


TTS
SBSTTGGGT


TT
S

TT

S

TT
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   735....740.........750.........760.........770.........780.........790.........800.........810....
 
   512.......520.........530. ........540........ .550.........560.... .....570........
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Query Sequence  ALYQRMIALRKKSQALRHGG. . . . . . . CQVLYAEDNVVVFVRVL. . . . . NQQRVLVAINRGEACE. VVLPASPFLNAVQW
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Template Sequence  DYFSSMIHLRNQHPAFRMTTADQIKQNLTFLESPTNTVAFELKNYANHDTWKNIIVMYNPNKTSQTLNLPSGDWTIVGLG
Template Known Secondary structure 
GGGG

S



TT

SSGGG
SSS

SSS


SS
T
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   815....820.........830.........840.........850.........860.........870.........880.........890....
 
   579580.........590.........600...
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Query Sequence  . QCKEGHGQLTDGILALPAISATVWM
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Template Sequence  DQIGEKSLGHVMGNVQVPAISTLILK
Template Known Secondary structure  TSSS
S

S
SS
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   895....900.........910.........920
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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