Job Description P21517 Confidence 95.62% Date Thu Jan 5 11:38:27 GMT 2012 Rank 221 Aligned Residues 79 % Identity 10% Template c2qlvB_ PDB info PDB header:transferase/protein binding Chain: B: PDB Molecule:protein sip2; PDBTitle: crystal structure of the heterotrimer core of the s.2 cerevisiae ampk homolog snf1 Resolution 2.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	I	T	L	W	L	T	G	E	D	P	P	Q	R	I	M	L	R	T	E	H	D	N	E	E	M	S	V	P	M	H	K	Q	R	S	Q	P	Q	P	G	V	T	A	W	R	A	A	I	D	L	S	S	G	Q	P	R	R	R	Y	S	F	K	L	L	W	H	D	R	Q	R	W	F	T	P	Q	G	F	S	R
Query Conservation
Alig confidence						.										.	.	.																			.	.	.	.															.	.										.	.	.
Template Conservation						.										.	.	.																			.	.	.	.															.	.										.	.	.
Template Sequence		V	E	I	R	.	W	Q	Q	G	G	S	K	V	Y	.	.	.	V	T	G	S	F	T	K	W	R	K	M	I	G	L	I	P	D	S	.	.	.	.	D	N	N	G	S	F	H	V	K	L	R	L	L	P	.	.	G	T	H	R	F	R	F	I	V	.	.	.	D	N	E	L	R	V	S	D	F	L	P	T	A
Template Known Secondary structure						.			S			S				.	.	.				G	G	G	T	T	S	S								S	.	.	.	.	S	S	T	T										S	.	.										.	.	.	T	T						T	T	S
Template Predicted Secondary structure						.										.	.	.																			.	.	.	.															.	.										.	.	.
Template SS confidence
		166	.	.	.		170	.	.	.	.	.	.	.	.				.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.					.	.	.	200	.	.	.	.	.	.	.	.	.	210			.	.	.	.	.	.	.	.	.				220	.	.	.	.	.	.	.	.	.	230	.	.
		100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	P	P	A	R	L	E	Q	F	A	V	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	D	Q	M	G	N	F	V	N	Y	I	E
Template Known Secondary structure				S	S
Template Predicted Secondary structure
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions