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Job DescriptionP21517
Confidence100.00%DateThu Jan 5 11:38:27 GMT 2012
Rank14Aligned Residues534
% Identity21%Templatec2fhfA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:pullulanase; PDBTitle: crystal structure analysis of klebsiella pneumoniae2 pullulanase complexed with maltotetraose
Resolution1.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8.10.........20.........30.........40.........50.........60.........70.........80.......
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Query Sequence  PVPPFVKQSKDQLLITLWLTGEDPPQRIMLRTEHDNEEMSVPMHKQRSQPQPGVTAWRAAIDLSSGQPRRRYSFKLLWHD
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Template Sequence  ALSYGAQLTDSGVTFRVWAPTAQQVE. LVIYSADKKVIASHPMTRD. . . . . SASGAWSWQ. . GGSDLKGAFYRYAMTVYH
Template Known Secondary structure  TS

TT
TT
S.
TT



.....TTT
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GGGTT
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   294.....300.........310......... 320.........330........ .340....... ..350.........360.....
 
   88.90.........100.........110..... ....120. ........130.........140....
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Query Sequence  . . . . . . . RQRWFTPQGFSRMPPARLEQFAVDVPDI. . GPQWAA. . . . . . . . . . . . . . DQIFYQIFPDRFARSLPREAEQD
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Template Sequence  PQSRKVEQYEVTDPYAHSLSTNSEYSQVVDLNDSALKPEGWDGLTMPHAQKTKADLAKMTIHESHIRDLSAWDQTVPA. .
Template Known Secondary structure  TTTT

TT
S
B
GGGSS
B
TT
GGGS
TTGGG


SS

SST

TT
TTS
G..
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   366...370.........380.........390.........400.........410.........420.........430.........440...
 
   145....150.........160.........170.........180..... ....190.........200.....
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Query Sequence  HVYYHHAAGQEIILRDWDEPVTAQAGGSTFYGGDLDGISEK. . . . . . . LPYLKKLGVTALYLNPVFKA. . . . . . . . . . . .
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ELRGKYLALTAQESNMVQHLKQLSASGVTHIELLPVFDLATVNEFSDKVAD
Template Known Secondary structure  .............................GGTTSGGGGG
TTST

S

SSS


GGG


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   444.....450.........460.........470.........480.........490....
 
   206...210.........220......
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . PSVHKYDTEDYRHVDPQFGGD
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Template Sequence  IQQPFSRLCEVNSAVKSSEFAGYCDSGSTVEEVLTQLKQNDSKDNPQVQALNTLVAQTDSYNWGYDPFHYTVPEGSYATD
Template Known Secondary structure  TTSB
TSTTGGGTTSS
BSTT
BTTB
TTSSS






STTSS
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   495....500.........510.........520.........530.........540.........550.........560.........570....
 
   227. .230........ .240.........250.........260.........270.........280.........290........
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Query Sequence  GA. . . . . . . LLRLRHNTQQ. LGMRLVLDGVFNHSGDSHAWFDRHNRGTGGACHNPESPWRDWYSFSDDGTALDWLGYASL
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Template Sequence  PEGTARIKEFRTMIQAIKQDLGMNVIMDVVYNHTNAAGPTDRTSVL. . . . . . . . . . DKIVPWYYQRLNETTGSVESATCC
Template Known Secondary structure 
STTTS


TTS

SSS
TT

..........STTTSB
B
TTT

B

TTSS
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   575....580.........590.........600.........610.........620 .........630.........640....
 
   299300.........310.........320.........330.........340.........350.........360.........370........
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Query Sequence  PKLDYQSESLVNEIYRGEDSIVRHWLKAPWNMDGWRLDVVHMLGEAGGARNNMQHVAGITEAAKETQPEAYIVGEHFGDA
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Template Sequence  SDSAPEHRMFAKLIADS. . . . LAVWTTD. YKIDGFRFDLMLYHPK. . . . . . . . AQILSAWERIKALNPDIYFFGEGWDSN
Template Known Secondary structure  B
TTS.....


TTGGGSB........TT
TT





S
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   645....650.........660. ....... .670.........680.... .....690.........700.........710.
 
   379380.........390..... ....400....... ..410.........420.........430....
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Query Sequence  RQWLQADVEDAAMNYRG. . . FTFPLWGFLANT. . . . . . . . . . . . . . . . . . . . DISYDPQQIDAQTCMAWMDNYRAGLSH.
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Template Sequence  QSDRFEIASQINLKGTGIGTFSDRLRDAVRGGGPFDSGDALRQNQGVGSGAGVLPNELTTLSDDQARHLADLTRLGMAGN
Template Known Secondary structure 
TTTS
B

TTTTTTSS


S
TT

TT


GGGTTTTS

SS



TT
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   712.......720.........730.........740.........750.........760.........770.........780.........790.
 
   435....440.........450......... 460.........470.....
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . QQQLRMFNQLDSHDTARFKTLLGRD. . . . . . . . . . IARLPLAVVWLFTWPG
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Template Sequence  LADFVLIDKDGAVKRGSEIDYNGAPGGYAADPTEVVNYVSKHDNQTLWDMISYKAAQEADLDTRVRMQAVSLATVMLGQG
Template Known Secondary structure  BTT

TTS
GGGSTTS

BSSGGG
S

SSSS
S
TT

TSSS
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   792.......800.........810.........820.........830.........840.........850.........860.........870.
 
   476...480.........490.. .......500....... ..510......
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Query Sequence  VPCIYYGDEVGLDGKND. . . . . . PFCRKPFPWQVEKQD. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . TALFALYQR
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Template Sequence  IAFDQQGSELLRSKSFTRDSYDSGDWFNRVDYSLQDNNYNVGMPRSSDDGSNYDIIARVKDAVATPGETELKQMTAFYQE
Template Known Secondary structure  TTGGGT


TT
S

TTS


TT
S

S
SSS


GGGTTSS



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   872.......880.........890.........900.........910.........920.........930.........940.........950.
 
   517..520.........530..... ....540.........550 .........560.... .....570..
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Query Sequence  MIALRKKSQALRHGGCQVL. . . . . . . . . . . YAEDNVVVFVRVLNQ. . . . . . . . . . QRVLVAINRGEACE. VVLPASPF. .
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Template Sequence  LTALRKSSPLFTLGDGATVMKRVDFRNTGADQQTGLLVMTIDDGMQAGASLDSRVDGIVVAINAAPESRTLQDFAGTSLQ
Template Known Secondary structure  TS
GGGG


S
STT

TT
STTTSS
S
TT
SSS

TTSSS

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   952.......960.........970.........980.........990.........1000.........1010.........1020.........1030.
 
   573......580.........590.........600...
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Query Sequence  . . . . . LNAVQWQCKEGHGQLTDGILALPAISATVWM
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Template Sequence  LSAIQQAAGDRSLASGVQVAADGSVTLPAWSVAVLE
Template Known Secondary structure 
TGGGSTTTT

TTS

TT
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   1032.......1040.........1050.........1060.......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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