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Job DescriptionP21517
Confidence89.98%DateThu Jan 5 11:38:27 GMT 2012
Rank276Aligned Residues156
% Identity17%Templatec2epoB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:n-acetyl-beta-d-glucosaminidase; PDBTitle: n-acetyl-b-d-glucosaminidase (gcna) from streptococcus gordonii
Resolution1.56 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   178.180.........190......... 200.........210.........220.........230.........240....... ..250..
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Query Sequence  DLDGISEKLPYLKKLGVTALYL. . . . NPVFKAPSVHKYDTEDYRHVDPQFGGDGALLRLRHNTQQLGMRLVLDG. VFNHS
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Template Sequence  NLSSAKKMIEVLALMGYSTFELYMEDTYEIENQPYFGYFRGRY. . . . . . . . TVAELQEIEDYAADFDMSFVPCIQTLAHL
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   100.........110.........120.........130.........140.. .......150.........160.........170.
 
   253......260.........270.........280.........290.........300.........310.........320.........330..
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Query Sequence  GDSHAWFDRHNRGTGGACHNPESPWRDWYSFSDDGTALDWLGYASLPKLDYQSESLVNEIYRGEDSIVRHWLKAPWNMDG
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Template Sequence  SAFVKWGIKEVQELRDVED. . . . . . . . . . . . . . . . . . . . . . . . . . . . ILLIGEEKVYDLIEGMFQTMA. . . . . . HLHTRK
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   172.......180.........190 .........200.........210. ......
 
   333.. ....340.........350 .........360.........370.....
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Query Sequence  WRL. . DVVHMLGEAGGARNN. . . . . . . . . MQHVAGITEAAKETQPEAYIVGEHF
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Template Sequence  INIGMDEAHLVGLGRYLIKHGFQNRSLLMCQHLERVLDIADKYGFNCQMWSDMF
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   218.220.........230.........240.........250.........260.........270.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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