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Job DescriptionP21517
Confidence100.00%DateThu Jan 5 11:38:27 GMT 2012
Rank71Aligned Residues390
% Identity19%Templatec1wpcA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:glucan 1,4-alpha-maltohexaosidase; PDBTitle: crystal structure of maltohexaose-producing amylase complexed with2 pseudo-maltononaose
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  GGDLDGISEKLPYLKKLGVTALYLNPVFKAPSV. . HKYDTEDY. . . . . . . . . RHVDPQFGGDGALLRLRHNTQQLGMRLV
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Template Sequence  GNHWNRLNSDASNLKSKGITAVWIPPAWKGASQNDVGYGAYDLYDLGEFNQKGTVRTKYGTRSQLQAAVTSLKNNGIQVY
Template Known Secondary structure  S
T




SSSTT

S
STT
SS
S
BTTBSS
SS

TT
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   21........30.........40.........50.........60.........70.........80.........90.........100
 
   245....250...... ...260.........270.........280....
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Query Sequence  LDGVFNHSGDSH. . . . . . . . . . . . . . . . . . . . . . . . . . AWFDRHNRGTGGACHNPESPWRDWYSFS. . . . . . . . . . . . . .
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Template Sequence  GDVVMNHKGGADATEMVRAVEVNPNNRNQEVTGEYTIEAWTRFDFPGRGNTHSSFKWRWYHFDGVDWDQSRRLNNRIYKF
Template Known Secondary structure 

S
S
STT
S

B

TTTTTSS



B
GGGS

TTT

SS
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   101........110.........120.........130.........140.........150.........160.........170.........180
 
   285....290.........300.........310.........320.........330.........340.........350.....
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Query Sequence  . . . . . . . . . DDGTALDWLGYASLPKLDYQSESLVNEIYRGEDSIVRHWLKAPWNMDGWRLDVVHMLGEAGGARNNMQHVA
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Template Sequence  RGHGKAWDWEVDTENGNYDYLMYADIDMDHPEVVNELRNW. . . . GVWYTNT. LGLDGFRIDAVKHIK. . . . . . . . YSFTR
Template Known Secondary structure 
STT



SS


TTS




SS
TT
.....T
STTGGGS
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   181........190.........200.........210.........220 ....... ..230.........240.. .....
 
   356...360.. .......370.........380.........390.........400.........410.........420.........430....
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Query Sequence  GITEAAK. ETQPEAYIVGEHFGDARQWLQADVEDAAMNYRGFTFPLWGFLANTDISYDPQQIDAQTCMAWMDNYRAGLSH
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Template Sequence  DWINHVRSATGKNMFAVAEFWKNDLGAIENYLQKTNWNHSVFDVPLHYNLYNASKSGGNYDMRNIFNGTVVQR. . . . . . .
Template Known Secondary structure  T






S
TTT
S
TTTT
S
GGGTTTT
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   248.250.........260.........270.........280.........290.........300.........310.........320
 
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Query Sequence  QQQLRMFNQLDSHDTARFKTLLGRDI. . ARLPLAVVWLFTWPGVPCIYYGDEVGLDGKNDPFCRKPFPWQVEKQDTALFA
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Template Sequence  . HPSHAVTFVDNHDSQPEEALESFVEEWFKPLAYALTLTREQGYPSVFYGDYYGIPTHGVPA. . . . . . . . . . . . . . . MRS
Template Known Secondary structure  .
GGG
S

TTTSTTSTT




TTTSSSSS
BGGGTB

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   321........330.........340.........350.........360.........370.........380. ...
 
   513......520.........530.........540........ .550.........560.........570.........580......
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Query Sequence  LYQRMIALRKKSQALRHGGCQVLYAEDNVVVFVRVL. . . . NQQRVLVAINRGEACEVVLPASPFLNAVQWQCKEGHGQ. .
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Template Sequence  KIDPILEARQKYAY. . . GKQNDYLDHHNIIGWTREGNTAHPNSGLATIMSDGAGGSKWMFVGRNKAGQVWSDITGNRTGT
Template Known Secondary structure  T

...S


SSS


TTSTT

SSS


GGGTT
TTSSS
S
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   385....390........ .400.........410.........420.........430.........440.........450.........460.
 
   587..590.........600....
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Query Sequence  . . . . . LTDGILALPAISATVWMN
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Template Sequence  VTINADGWGNFSVNGGSVSIWVN
Template Known Secondary structure 

TTS
TT
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Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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