Job Description P21517 Confidence 94.90% Date Thu Jan 5 11:38:27 GMT 2012 Rank 232 Aligned Residues 144 % Identity 13% Template c1qbaA_ PDB info PDB header:glycosyl hydrolase Chain: A: PDB Molecule:chitobiase; PDBTitle: bacterial chitobiase, glycosyl hydrolase family 20 Resolution 1.85 Å

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		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.										200	.	.	.	.	.	.							.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.											.	.	.	.	.	230	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.								.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.								.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.
Query Sequence		D	L	D	G	I	S	E	K	L	P	Y	L	K	K	L	G	V	T	A	L	Y	L	.	.	.	.	.	.	.	.	.	N	P	V	F	K	A	P	.	.	.	.	.	.	S	V	H	K	Y	D	T	E	D	Y	R	H	V	D	P	Q	F	G	.	.	.	.	.	.	.	.	.	.	G	D	G	A	L	L	R	L
Query Conservation																								.	.	.	.	.	.	.	.	.								.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.								.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	K	D	A	V	L	R	L	L	D	Q	M	A	A	Y	K	L	N	K	F	H	F	H	L	S	D	D	E	G	W	R	I	E	I	P	G	L	P	E	L	T	E	V	G	G	Q	R	C	H	D	L	S	E	T	T	C	L	L	P	Q	Y	G	Q	G	P	D	V	Y	G	G	F	F	S	R	Q	D	Y	I	D	I
Template Known Secondary structure																T	T									B		S	S		B		B			T	T		T					T	T	T				S		T	T		S	S	S	B				T	T	S		S	S						B
Template Predicted Secondary structure
Template SS confidence
		353	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.		.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
Predicted Secondary structure																	.
Query SS confidence																	.
Query Sequence		R	H	N	T	Q	Q	L	G	M	R	L	V	L	D	G	.	V	F	N	H	S	G	D	S	H	A	W	F	D	R	H	N	R	G	T	G	G	A	C	H	N	P	E	S	P	W	R	D	W	Y	S	F	S	D	D	G	T	A	L	D	W	L	G	Y	A	S	L	P	K	L	D	Y	Q	S	E	S	L	V	N	E
Query Conservation																	.
Alig confidence																	.
Template Conservation
Template Sequence		I	K	Y	A	Q	A	R	Q	I	E	V	I	P	E	I	D	M	P	A	H	A	R	A	A	V	V	S	M	E	A	R	Y	K	K	L	H	A	A	G	K	E	Q	E	A	N	E	F	R	L	V	D	P	T	D	T	S	N	T	T	S	V	Q	F	F	N	R	Q	S	Y	L	N	P	C	L	D	S	S	Q	R	F
Template Known Secondary structure								T	T										S	S	S																		T	T							T	T					T	T								T	T	S			G	G	G	S			T	T
Template Predicted Secondary structure
Template SS confidence
		433	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.
		312	.	.	.	.	.	.	.	320	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	Y	R	G	E	D	S	I	V	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	D	K	V	I	G	E	I	A	Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		513	.	.	.	.	.	.	520	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions