Job Description P21517 Confidence 100.00% Date Thu Jan 5 11:38:27 GMT 2012 Rank 4 Aligned Residues 557 % Identity 31% Template c1jibA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:neopullulanase; PDBTitle: complex of alpha-amylase ii (tva ii) from thermoactinomyces2 vulgaris r-47 with maltotetraose based on a crystal soaked3 with maltohexaose. Resolution 3.30 Å

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		5	.	.	.	.	10	.	.		.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure										.
Query SS confidence										.
Query Sequence		W	H	L	P	V	P	P	F	.	V	K	Q	S	K	D	Q	L	L	I	T	L	W	L	T	G	E	D	P	P	Q	R	I	M	L	R	T	E	H	D	N	E	E	M	S	V	P	M	H	K	Q	R	S	Q	P	Q	P	G	V	T	A	W	R	A	A	I	D	L	S	S	G	Q	P	R	R	R	Y	S	F	K	L
Query Conservation										.
Alig confidence										.
Template Conservation
Template Sequence		F	H	E	A	K	G	S	Y	A	Y	P	I	S	E	T	Q	L	R	V	R	L	R	A	K	K	G	D	V	V	R	C	E	V	L	Y	A	D	R	Y	A	S	P	E	E	E	L	A	H	A	L	A	G	K	A	G	S	D	E	R	F	D	Y	F	E	A	L	L	E	C	S	T	K	R	V	K	Y	V	F	L	L
Template Known Secondary structure		B			S	S	T	T	T						T	T										T	T	T		S									T	T			S	S	S														S	S											T	T	S
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110						.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.
Query SS confidence																													.	.	.	.	.
Query Sequence		L	W	H	D	R	Q	R	W	F	T	P	Q	G	F	S	R	M	P	P	A	R	L	E	Q	F	A	V	.	.	.	.	.	D	V	P	D	I	G	P	Q	W	A	A	D	Q	I	F	Y	Q	I	F	P	D	R	F	A	R	S	L	P	R	E	A	E	Q	D	H	V	Y	Y	H	H	A	A	G	Q	E	I	I	L
Query Conservation																													.	.	.	.	.
Alig confidence																													.	.	.	.	.
Template Conservation
Template Sequence		T	G	P	Q	G	E	A	V	Y	F	G	E	T	G	F	S	A	E	R	S	K	A	G	V	F	Q	Y	A	Y	I	H	R	S	E	V	F	T	T	P	E	W	A	K	E	A	V	I	Y	Q	I	F	P	E	R	F	A	N	G	D	P	S	N	D	P	P	G	T	E	Q	W	A	K	D	A	R	P	R	H	D	S
Template Known Secondary structure				T	T								T	T				S	S	T	T	T	T										G	G	G	S									T								G	G	G	T					T	T	T			T	T						T	T					T	T
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	D	W	D	E	P	V	T	A	Q	A	G	G	S	T	F	Y	G	G	D	L	D	G	I	S	E	K	L	P	Y	L	K	K	L	G	V	T	A	L	Y	L	N	P	V	F	K	A	P	S	V	H	K	Y	D	T	E	D	Y	R	H	V	D	P	Q	F	G	G	D	G	A	L	L	R	L	R	H	N	T	Q	Q
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	Y	G	G	D	L	K	G	V	I	D	R	L	P	Y	L	E	E	L	G	V	T	A	L	Y	F	T	P	I	F	A	S	P	S	H	H	K	Y	D	T	A	D	Y	L	A	I	D	P	Q	F	G	D	L	P	T	F	R	R	L	V	D	E	A	H	R
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												T								T		S											S	S	S	S			S		S							T	T	T															T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																	167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.									.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure																																																				.	.	.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.	.	.
Query Sequence		L	G	M	R	L	V	L	D	G	V	F	N	H	S	G	D	S	H	A	W	F	D	R	H	N	R	G	T	G	G	A	C	H	N	P	E	S	P	W	R	D	W	Y	S	F	S	D	D	G	T	.	.	.	.	.	.	.	.	A	L	D	W	L	G	Y	A	S	L	P	K	L	D	Y	Q	S	E	S	L	V	N
Query Conservation																																																				.	.	.	.	.	.	.	.
Alig confidence																												.	.	.	.	.	.																			.	.	.	.	.	.	.	.
Template Conservation																												.	.	.	.	.	.
Template Sequence		R	G	I	K	I	I	L	D	A	V	F	N	H	A	G	D	Q	F	F	A	F	R	D	V	L	Q	.	.	.	.	.	.	K	G	E	Q	S	R	Y	K	D	W	F	F	I	E	D	F	P	V	S	K	T	S	R	T	N	Y	E	T	F	A	V	Q	V	P	A	M	P	K	L	R	T	E	N	P	E	V	K	E
Template Known Secondary structure		T	T										S	B			T	T	S									.	.	.	.	.	.		G	G	G		T	T	G	G	G	S		B		S	S	S				S	S	S		S	B		B	S	S	S	S		T	T		B	B			T	T	S
Template Predicted Secondary structure																												.	.	.	.	.	.
Template SS confidence
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.							.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390
Predicted Secondary structure
Query SS confidence
Query Sequence		E	I	Y	R	G	E	D	S	I	V	R	H	W	L	K	A	P	W	N	M	D	G	W	R	L	D	V	V	H	M	L	G	E	A	G	G	A	R	N	N	M	Q	H	V	A	G	I	T	E	A	A	K	E	T	Q	P	E	A	Y	I	V	G	E	H	F	G	D	A	R	Q	W	L	Q	A	D	V	E	D	A	A
Query Conservation
Alig confidence							.	.	.	.						.	.																	.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.						.	.																	.	.	.	.	.	.	.	.
Template Sequence		Y	L	F	D	V	.	.	.	.	A	R	F	W	M	.	.	E	Q	G	I	D	G	W	R	L	N	V	A	N	E	V	D	.	.	.	.	.	.	.	.	H	A	F	W	R	E	F	R	R	L	V	K	S	L	N	P	D	A	L	I	V	G	E	I	W	H	D	A	S	G	W	L	M	G	D	Q	F	D	S	V
Template Known Secondary structure							.	.	.	.						.	.	T	T	T							T	T	G	G	G	S		.	.	.	.	.	.	.	.																T	T								S	S			T	T	T	T	T	T	T	S		S
Template Predicted Secondary structure							.	.	.	.						.	.																	.	.	.	.	.	.	.	.
Template SS confidence
		306	.	.	.	310					.	.	.	.	.			.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.									.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.
		391	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470
Predicted Secondary structure
Query SS confidence
Query Sequence		M	N	Y	R	G	F	T	F	P	L	W	G	F	L	A	N	T	D	I	S	Y	D	P	Q	Q	I	D	A	Q	T	C	M	A	W	M	D	N	Y	R	A	G	L	S	H	Q	Q	Q	L	R	M	F	N	Q	L	D	S	H	D	T	A	R	F	K	T	L	L	G	R	D	I	A	R	L	P	L	A	V	V	W	L
Query Conservation
Alig confidence						.												.	.	.	.	.	.	.
Template Conservation						.												.	.	.	.	.	.	.
Template Sequence		M	N	Y	L	.	F	R	E	S	V	I	R	F	F	A	T	.	.	.	.	.	.	.	G	E	I	H	A	E	R	F	D	A	E	L	T	R	A	R	M	L	Y	P	E	Q	A	A	Q	G	L	W	N	L	L	D	S	H	D	T	E	R	F	L	T	S	C	G	G	N	E	A	K	F	R	L	A	V	L	F	Q
Template Known Secondary structure		B				.										T	S	.	.	.	.	.	.	.			S														T	T	S						T	T					S			T	T	S							T	T	T
Template Predicted Secondary structure						.												.	.	.	.	.	.	.
Template SS confidence
		372	.	.	.		.	.	.	.	380	.	.	.	.	.	.								.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.
		471	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540			.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																								.	.
Query SS confidence																																																																								.	.
Query Sequence		F	T	W	P	G	V	P	C	I	Y	Y	G	D	E	V	G	L	D	G	K	N	D	P	F	C	R	K	P	F	P	W	Q	V	E	K	Q	D	T	A	L	F	A	L	Y	Q	R	M	I	A	L	R	K	K	S	Q	A	L	R	H	G	G	C	Q	V	L	Y	A	E	D	N	.	.	V	V	V	F	V	R	V	L
Query Conservation																																																																								.	.
Alig confidence																																																																								.	.
Template Conservation
Template Sequence		M	T	Y	L	G	T	P	L	I	Y	Y	G	D	E	I	G	M	A	G	A	T	D	P	D	C	R	R	P	M	I	W	E	E	K	E	Q	N	R	G	L	F	E	F	Y	K	E	L	I	R	L	R	H	R	L	A	S	L	T	R	G	N	V	R	S	W	H	A	D	K	Q	A	N	L	Y	A	F	V	R	T	V
Template Known Secondary structure		T	T	S	S	S						T	T	G	G	G	T					S	T	T	T	T								G	G	G	S																			T														T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		444	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.
		549	550	.	.	.	.	.	.	.	.	.	560	.		.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590				.	.	.	.	.	.	.	.	.	600	.	.	.	.
Predicted Secondary structure															.																														.	.	.
Query SS confidence															.																														.	.	.
Query Sequence		N	Q	Q	R	V	L	V	A	I	N	R	G	E	.	A	C	E	V	V	L	P	A	S	P	F	L	N	A	V	Q	W	Q	C	K	E	G	H	G	Q	L	T	D	G	.	.	.	I	L	A	L	P	A	I	S	A	T	V	W	M	N
Query Conservation															.																														.	.	.
Alig confidence															.																														.	.	.
Template Conservation
Template Sequence		Q	D	Q	H	V	G	V	V	L	N	N	R	G	E	K	Q	T	V	L	L	Q	V	P	E	S	G	G	K	T	W	L	D	C	L	T	G	E	E	V	H	G	K	Q	G	Q	L	K	L	T	L	R	P	Y	Q	G	M	I	L	W	N
Template Known Secondary structure		T	T										S	S	S										T	T	S		S					T	T	S								T	T								T	T
Template Predicted Secondary structure
Template SS confidence
		524	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.