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Job DescriptionP21517
Confidence100.00%DateThu Jan 5 11:38:27 GMT 2012
Rank81Aligned Residues391
% Identity16%Templatec1jdaA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:1,4-alpha maltotetrahydrolase; PDBTitle: maltotetraose-forming exo-amylase
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   137..140.........150.........160.........170........ .180.........190.........200......
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Query Sequence  LPREAEQDHVYYHHAAGQEIILRDWDEPVTAQAGGSTFYGGD. LDGISEKLPYLKKLGVTALYLNPVFKAP. . . . . . . . .
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Template Sequence  DQAGKSPNAVRYHGGDEIILQGFHWNVVREAP. . . . . . . . NDWYNILRQQAATIAADGFSAIWMPVPWRDFSSWSDGSKS
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TT



GGG





TTST........TTTT
S


S




B
SSS

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   1........10.........20.........30.. .......40.........50.........60.........70..
 
   207..210.........220.........230.........240.........250.........260.........270.........280.....
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Query Sequence  . SVHKYDTEDYRHVDPQFGGDGALLRLRHNTQQLGMRLVLDGVFNHSGDSHAWFDRHNRGTGGACHNPESPWRDWYSFSD
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Template Sequence  GGGEGYFWHDF. NKNGRYGSDAQLRQAASALGGAGVKVLYDVVPNHMNRGYPDKEINLPAGQGFWRNDCADPGNYPNDCD
Template Known Secondary structure  B

SSTT


S.


SSS

TT

TTB

TT
SS
S



SSSS
BGGGS


SSS
BTTB
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   73......80... ......90.........100.........110.........120.........130.........140.........150.
 
   286...290.........300.........310.........320.........330.........340.........350.........360.....
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Query Sequence  DGTALDWLGYASLPKLDYQSESLVNEIYRGEDSIVRHWLKAPWNMDGWRLDVVHMLGEAGGARNNMQHVAGITEAAKETQ
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Template Sequence  DGDR. . . . FIGGDADLNTGHPQVYGMFRDE. . . . FTNLRSQ. YGAGGFRFDFVRGYA. . . . . . . . PERVNSW. . . MTDSA
Template Known Secondary structure  SS

....STTSSSBB
TTS.....S
S
GGGS
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   152... ....160.........170....... ..180.... .....190......... 200...... ...210.
 
   366...370.........380.........390.........400.........410.........420.........430.........440.....
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Query Sequence  PEAYIVGEHFGDARQWLQADVEDAAMNYRGFTFPLWGFLANTDISYDPQQIDAQTCMAWMDNYRAGLSHQQQLRMFNQLD
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Template Sequence  DNSFCVGQLWKGPSEYPNWDWRNTASWQQIIKDWSDRAKCPVFDFALKERMQNGSIADWKHGLNGNPDPRWREVAVTFVD
Template Known Secondary structure  TTS




GGGS
TTSGGGSS

S

S
GGGGGGSGGG
SSTT
S
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   212.......220.........230.........240.........250.........260.........270.........280.........290.
 
   446...450......... 460.........470.........480.........490.........500.........510.........
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Query Sequence  SHDTARFKTLLGRD. . . . . . IARLPLAVVWLFTWPGVPCIYYGDEVGLDGKNDPFCRKPFPWQVEKQDTALFALYQRMIA
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Template Sequence  NHDTGYSPGQNGGQHHWALQDGLIRQAYAYILTSPGTPVVYWDHMYDWG. . . . . . . . . . . . . . . . . . . . . YGDFIRQLIQ
Template Known Secondary structure 
TTTS

SSGGG


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   292.......300.........310.........320.........330.........340 .........350
 
   520.........530.........540.........550.........560.........570........
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Query Sequence  LRKKSQALRHGGCQVLYAEDNVVVFVRVLNQQRVLVAINRGEACEVVLPASPFLNAVQW
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Template Sequence  VRRAAGVRADSAISFHSGYSGLVATVS. GSQQTLVVALNSDLGNPGQVASGSFSEAVNA
Template Known Secondary structure  T

TT

TTSSS.
SS
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GGGT

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   351........360.........370....... ..380.........390.........400........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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