Job Description P21517 Confidence 62.05% Date Thu Jan 5 11:38:27 GMT 2012 Rank 460 Aligned Residues 123 % Identity 15% Template c1djnB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:trimethylamine dehydrogenase; PDBTitle: structural and biochemical characterization of recombinant wild type2 trimethylamine dehydrogenase from methylophilus methylotrophus (sp.3 w3a1) Resolution 2.20 Å

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		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	G	A	L	L	R	L	R	H	N	T	Q	Q	L	G	M	R	L	V	L	D	G	V	F	N	H	S	G	D	S	H	A	W	F	D	R	H	N	R	G	T	G	G	A	C	H	N	P	E	S	P	W	R	D	W	Y	S	F	S	D	D	G	T	A	L	D	W	L	G	Y	A	S	L	P	K	L	D	Y	Q	S
Query Conservation
Alig confidence																							.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	R	N	L	K	A	M	T	D	E	V	H	K	Y	G	A	L	A	G	V	E	.	.	L	W	Y	G	G	A	H	A	P	N	M	E	S	R	A	T	P	R	G	P	S	Q	Y	A	S	E	F	E	T	L	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	C	K	E	M	D
Template Known Secondary structure															T	T							.	.					G	G	G	S			T	T	T							S	S			B		S	S	S	T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	B
Template Predicted Secondary structure																							.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.			.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.																					.	.	.	.	.	140
		306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.																.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370
Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	S	L	V	N	E	I	Y	R	G	E	D	S	I	V	R	H	W	L	K	A	P	W	N	M	D	G	W	R	L	D	V	V	H	M	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	E	A	G	G	A	R	N	N	M	Q	H	V	A	G	I	T	E	A	A	K	E	T	Q	P	E	A	Y	I
Query Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.
Template Sequence		L	S	D	I	A	Q	V	Q	Q	F	Y	V	D	A	A	K	R	S	R	D	A	.	.	G	F	D	I	V	Y	V	Y	G	A	H	S	Y	L	P	L	Q	F	L	N	P	Y	Y	N	K	R	T	D	K	Y	G	G	S	L	E	N	R	A	R	F	W	L	E	T	L	E	K	V	K	H	A	V	G	S	D	C	A
Template Known Secondary structure																						T	.	.	T		S								T	T									T	T	T					S	T	T	S	S	S																				T	T	T	S
Template Predicted Secondary structure																							.	.
Template SS confidence
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.			.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
		371	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		219	220

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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