Job Description P21517 Confidence 100.00% Date Thu Jan 5 11:38:27 GMT 2012 Rank 104 Aligned Residues 275 % Identity 18% Template c1bplB_ PDB info PDB header:glycosyltransferase Chain: B: PDB Molecule:alpha-1,4-glucan-4-glucanohydrolase; PDBTitle: glycosyltransferase Resolution 2.20 Å

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		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.		.	.	.	.	.	370	.
Predicted Secondary structure																																																																										.
Query SS confidence																																																																										.
Query Sequence		L	G	Y	A	S	L	P	K	L	D	Y	Q	S	E	S	L	V	N	E	I	Y	R	G	E	D	S	I	V	R	H	W	L	K	A	P	W	N	M	D	G	W	R	L	D	V	V	H	M	L	G	E	A	G	G	A	R	N	N	M	Q	H	V	A	G	I	T	E	A	A	K	E	T	.	Q	P	E	A	Y	I	V
Query Conservation																																																																										.
Alig confidence																									.	.	.	.								.																.	.	.	.	.	.	.	.															.
Template Conservation																									.	.	.	.								.																.	.	.	.	.	.	.	.
Template Sequence		Y	D	Y	L	M	Y	A	D	I	D	Y	D	H	P	D	V	A	A	E	I	K	R	W	.	.	.	.	G	T	W	Y	A	N	E	.	L	Q	L	D	G	F	R	L	D	A	V	K	H	I	K	.	.	.	.	.	.	.	.	F	S	F	L	R	D	W	V	N	H	V	R	E	K	T	G	K	E	M	F	T	V
Template Known Secondary structure			G	G	G	G						T	T	S											.	.	.	.								.		T									G	G	G	S		.	.	.	.	.	.	.	.																T	S
Template Predicted Secondary structure																									.	.	.	.								.																.	.	.	.	.	.	.	.
Template SS confidence
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.					.	.	.	.	220	.	.		.	.	.	.	.	.	.	230	.	.	.	.	.	.	.									.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
		372	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	E	H	F	G	D	A	R	Q	W	L	Q	A	D	V	E	D	A	A	M	N	Y	R	G	F	T	F	P	L	W	G	F	L	A	N	T	D	I	S	Y	D	P	Q	Q	I	D	A	Q	T	C	M	A	W	M	D	N	Y	R	A	G	L	S	H	Q	Q	Q	L	R	M	F	N	Q	L	D	S	H	D	T	A	R
Query Conservation
Alig confidence																																																		.	.	.	.	.	.	.	.
Template Conservation																																																		.	.	.	.	.	.	.	.
Template Sequence		A	E	Y	W	Q	N	D	L	G	A	L	E	N	Y	L	N	K	T	N	F	N	H	S	V	F	D	V	P	L	H	Y	Q	F	H	A	A	S	T	Q	G	G	G	Y	D	M	R	K	L	.	.	.	.	.	.	.	.	L	N	S	T	V	V	S	K	H	P	L	K	A	V	T	F	V	D	N	H	D	T	Q	P
Template Known Secondary structure							S												T	T	T		S																	T	T	T		S		G	G	G	G	.	.	.	.	.	.	.	.	G	S	S	S						G	G	G					S			T	T	T	S	T
Template Predicted Secondary structure																																																		.	.	.	.	.	.	.	.
Template SS confidence
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.									.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
		452	.	.	.	.	.	.			.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.
Predicted Secondary structure									.	.
Query SS confidence									.	.
Query Sequence		F	K	T	L	L	G	R	.	.	D	I	A	R	L	P	L	A	V	V	W	L	F	T	W	P	G	V	P	C	I	Y	Y	G	D	E	V	G	L	D	G	K	N	D	P	F	C	R	K	P	F	P	W	Q	V	E	K	Q	D	T	A	L	F	A	L	Y	Q	R	M	I	A	L	R	K	K	S	Q	A	L	R	H
Query Conservation									.	.
Alig confidence									.	.																																								.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.
Template Conservation																																																		.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.
Template Sequence		G	Q	S	L	E	S	T	V	Q	T	W	F	K	P	L	A	Y	A	F	I	L	T	R	E	S	G	Y	P	Q	V	F	Y	G	D	M	Y	G	T	K	G	D	S	Q	R	E	I	P	A	.	.	.	.	.	.	.	.	.	.	.	.	L	K	H	K	I	E	P	I	L	K	A	R	K	Q	Y	A	Y	.	.	.
Template Known Secondary structure		T	S	T	T						T	T	T											S	S	S	S															S	S	T	T					.	.	.	.	.	.	.	.	.	.	.	.															T			.	.	.
Template Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.
Template SS confidence
		332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.													380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
		530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.					.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.								.	590	.	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.																																					.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.																																					.	.	.	.	.	.	.
Query Sequence		G	G	C	Q	V	L	Y	A	E	D	N	V	V	V	F	V	R	V	L	N	Q	Q	R	.	.	.	.	V	L	V	A	I	N	R	G	E	A	C	E	V	V	L	P	A	S	P	F	L	N	A	V	Q	W	Q	C	K	E	G	H	G	Q	L	T	.	.	.	.	.	.	.	D	G	I	L	A	L	P	A	I	S
Query Conservation																									.	.	.	.																																					.	.	.	.	.	.	.
Alig confidence																									.	.	.	.																																					.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	A	Q	H	D	Y	F	D	H	H	D	I	V	G	W	T	R	E	G	D	S	S	V	A	N	S	G	L	A	A	L	I	T	D	G	P	G	G	A	K	R	M	Y	V	G	R	Q	N	A	G	E	T	W	H	D	I	T	G	N	R	S	E	P	V	V	I	N	S	E	G	W	G	E	F	H	V	N	G	G	S
Template Known Secondary structure		S								S	S	S									B	T	T	B	T	T									S	S	S										G	G	G	T	T						T	T	S	S									T	T	S								T	T
Template Predicted Secondary structure
Template SS confidence
		397	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.
		599	600	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	T	V	W	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	S	I	Y	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		477	.	.	480	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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