Job Description P76114 Confidence 96.22% Date Thu Jan 5 12:19:06 GMT 2012 Rank 65 Aligned Residues 113 % Identity 11% Template d1ylfa1 SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Transcriptional regulator Rrf2 Resolution 2.50

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	V	S	L	T	L	Q	V	E	N	D	L	K	H	Q	L	S	I	G	A	L	K	P	G	A	R	L	I	T	K	N	L	A	E	Q	L	G	M	S	I	T	P	V	R	E	A	L	L	R	L	V	S	V	N	A	L	S	V	A	P	A	Q	A	F	T	V	P	E	V	G	K	R	Q	L	D	E	I	N	R	I
Query Conservation
Alig confidence																					.	.	.																																					.	.	.
Template Conservation																					.	.	.																																					.	.	.
Template Sequence		K	I	S	S	R	F	S	I	A	V	H	I	L	S	I	L	K	N	N	.	.	.	P	S	S	L	C	T	S	D	Y	X	A	E	S	V	N	T	N	P	V	V	I	R	K	I	X	S	Y	L	K	Q	A	G	F	V	Y	V	.	.	.	N	G	G	A	G	L	L	K	D	L	H	E	I	T	L	L	D	V	Y
Template Known Secondary structure																				S	.	.	.		G	G	G											T	S															T	T	S				.	.	.							S	S		G	G	G		B
Template Predicted Secondary structure																					.	.	.																																					.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.				.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.				60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Y	E	L	E	L	M	A	V	A	L	A	V	E	N	L	T	P	Q	D	L	A	E	L	Q	E	L	L	E	K	L	Q	Q	A	Q	E	K	G	D	M	E	Q	I	I	N
Query Conservation
Alig confidence					.	.	.	.	.	.
Template Conservation					.	.	.	.	.	.
Template Sequence		H	A	V	.	.	.	.	.	.	N	V	I	G	A	N	I	Q	A	V	L	E	I	I	L	I	Q	A	Q	S	A	X	E	E	V	L	R	N	I	T	X	G	Q	L	F	E
Template Known Secondary structure					.	.	.	.	.	.																												T		B
Template Predicted Secondary structure					.	.	.	.	.	.
Template SS confidence
		82	.	.							.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions