Job Description P76114 Confidence 99.66% Date Thu Jan 5 12:19:06 GMT 2012 Rank 16 Aligned Residues 92 % Identity 22% Template d1v4ra1 SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain GntR-like transcriptional regulators Resolution UNK

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.		.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																						.
Query SS confidence																																						.
Query Sequence		M	P	G	T	G	K	M	K	H	V	S	L	T	L	Q	V	E	N	D	L	K	H	Q	L	S	I	G	A	L	K	P	G	A	R	L	I	.	T	K	N	L	A	E	Q	L	G	M	S	I	T	P	V	R	E	A	L	L	R	L	V	S	V	N	A	L	S	V	A	P	A	Q	A	F	T	V	P	E	V	G	K
Query Conservation																																						.
Alig confidence							.	.																														.
Template Conservation							.	.
Template Sequence		M	P	Y	K	A	.	.	P	E	G	K	G	Y	A	D	V	A	T	H	F	R	T	L	I	K	S	G	E	L	A	P	G	D	T	L	P	S	V	A	D	I	R	A	Q	F	G	V	A	A	K	T	V	S	R	A	L	A	V	L	K	S	E	G	L	V	S	S	R	G	A	L	G	T	V	V	E	K	N	P	I
Template Known Secondary structure							.	.		S	S														T	T	T	T	S			T	T	S	B											S	S	S		T	T						T	T	T	T	T	T	S	S						T	T	T				S		S
Template Predicted Secondary structure							.	.
Template SS confidence
		1	.	.	.	.			.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Q	L	D	E	I	N	R	I	R	Y	E	L	E	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	I	T	G	A	D	R	L	K	R	M	E	K	N	G
Template Known Secondary structure				S	S							T	T	S
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions